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WormBase Tree Display for Gene: WBGene00009168

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Name Class

WBGene00009168SMapS_parentSequenceF26F2
IdentityVersion1
NameSequence_nameF26F2.3
Molecular_nameF26F2.3
F26F2.3.1
CE19815
Other_nameCELE_F26F2.3Accession_evidenceNDBBX284605
Public_nameF26F2.3
DB_infoDatabaseAceViewgene5V34
WormQTLgeneWBGene00009168
WormFluxgeneWBGene00009168
NDBlocus_tagCELE_F26F2.3
NCBIgene184984
RefSeqproteinNM_075567.2
TrEMBLUniProtAccQ9XV56
UniProt_GCRPUniProtAccQ9XV56
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:49WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (33)
RNASeq_FPKM (74)
GO_annotation00102275
00102276
00102277
OrthologchrV_pilon.g18119Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in ABplapppapp; ABprapppapp; and neurons based on single-cell RNA-seq and RNA-seq studies. Is affected by several genes including skn-1; eat-2; and elt-2 based on microarray; tiling array; and RNA-seq studies. Is affected by twelve chemicals including nanoparticle; Psoralens; and allantoin based on microarray and RNA-seq studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF26F2.3
Corresponding_transcriptF26F2.3.1
Experimental_infoRNAi_resultWBRNAi00070081Inferred_automaticallyRNAi_primary
WBRNAi00045658Inferred_automaticallyRNAi_primary
WBRNAi00013956Inferred_automaticallyRNAi_primary
WBRNAi00031458Inferred_automaticallyRNAi_primary
Expr_patternExpr1012385
Expr1033998
Expr1149574
Expr2003029
Expr2021244
Drives_constructWBCnstr00032404
Construct_productWBCnstr00032404
Microarray_results (14)
Expression_clusterWBPaper00032425:up_in_lin-35
WBPaper00032528:L3_depleted
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
WBPaper00037950:all-neurons_L1-larva_expressed
WBPaper00037950:bodywall-muscle_L1-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L1-larva_expressed
WBPaper00037950:intestine_L1-larva_expressed
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00038168:lin-15B(n744)_upregulated
WBPaper00038168:lin-35_upregulated
WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00042194:nhr-114(RNAi)_downregulated
WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray
WBPaper00045401:N.parisii_8h_upregulated
WBPaper00045401:N.parisii_16h_upregulated
WBPaper00045401:N.parisii_30h_upregulated
WBPaper00045401:N.parisii_40h_upregulated
WBPaper00045918:96h_infection_recovery_downregulated
WBPaper00049484:elt-2(RNAi)_upregulated_L4
WBPaper00050163:chd-3(eh4);let-418(RNAi)_upregulated_100-cell-embryo
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050504:hrp-2(RNAi)_upregulated
WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00051137:N.parisii-virus_upregulated_N2
WBPaper00051137:Orsay-virus_upregulated_N2
WBPaper00051137:Orsay-virus_upregulated_rde-1(ne219)
WBPaper00051371:Orsay-virus-infection_upregulated_rde-1(ne219)
WBPaper00051558:aging_regulated
WBPaper00053020:OrsayVirus-infection_upregulated
WBPaper00053020:OrsayVirus-infection_upregulated_microarray
WBPaper00053295:lin-22(ot269)_upregulated
WBPaper00053737:Anatase-TiO2-Nanoparticles_upregulated
WBPaper00053888:drh-3(rrr2)_downregulated
WBPaper00055013:hmg-3(bar24)_upregulated
WBPaper00055013:hmg-4(RNAi)_upregulated
WBPaper00055013:spt-16(RNAi)_upregulated
WBPaper00055226:adr-1(tm668)_upregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Metformin_upregulated
WBPaper00055354:Rapamycin-Psora-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_upregulated
WBPaper00055354:Rapamycin-Rifampicin-Psora_upregulated
WBPaper00055354:Rapamycin-Rifampicin_upregulated
WBPaper00055354:Rifampicin-Allantoin_upregulated
WBPaper00055354:Rifampicin-Psora_upregulated
WBPaper00055354:Rifampicin_upregulated
WBPaper00056809:smn-1(ok355)_upregulated
WBPaper00057068:ints-4(RNAi)_upregulated
WBPaper00057068:ints-4(RNAi)_upregulated_Cadmium
WBPaper00058711:paraquat_downregulated
WBPaper00058711:skn-1(lax188)_upregulated
WBPaper00058711:wdr-5(ok1417)_downregulated
WBPaper00058725:sftb-1(cer6)_upregulated
WBPaper00059426:Ag-nanoparticles_downregulated
WBPaper00059426:SiO2-nanoparticles_downregulated
WBPaper00060014:set-2(tm1630)_upregulated
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060811:L1_vs_adult_upregulated_neural
WBPaper00060871:M.humicola-extract_4h_regulated
WBPaper00060886:spr-5(by101);met-2(n4256)_upregulated
WBPaper00061040:eat-2(ad1116)_upregulated
WBPaper00061319:pnp-1(jy90)_upregulated
WBPaper00061319:pnp-1(jy121)_upregulated
WBPaper00061340:Neuroblast_HSN_PHB
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061527:C17H1.6-C17H1.13
WBPaper00061530:nhr-49(e2144)_upregulated
WBPaper00062056:lin-15B(n744)_upregulated
WBPaper00062103:neuron_enriched
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062345:bortezomib_4h_upregulated_N2
WBPaper00062345:bortezomib_4h_upregulated_zip-1(jy13)
WBPaper00062345:bortezomib_30min_upregulated_N2
WBPaper00062345:bortezomib_30min_upregulated_zip-1(jy13)
WBPaper00062497:xpf-1(tm2842)_downregulated
WBPaper00064107:lin-35(n745)_upregulated
WBPaper00064229:B.thuringiensis-Cry5Ba_downregulated
WBPaper00064532:pals-22(jy3)_upregulated
WBPaper00064661:lpd-3(ok2138)_upregulated
WBPaper00065086:JU1400_N.ausubeli_regulated
WBPaper00065086:JU1400_N.ferruginous_regulated
WBPaper00065086:JU1400_N.ironsii_regulated
WBPaper00065086:JU1400_N.parisii_regulated
WBPaper00065086:N2_N.ausubeli_regulated
WBPaper00065086:N2_N.ferruginous_regulated
WBPaper00065086:N2_N.ironsii_regulated
WBPaper00065086:N2_N.parisii_regulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065096:npr-8(ok1439)_downregulated_Day10_20C
WBPaper00065096:npr-8(ok1439)_downregulated_Day10_25C
WBPaper00065841:65_0
WBPaper00065984:pals-17(syb3980)_upregulated
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00065995:M.humicola-extract_downregulated_N2
WBPaper00066146:germline-inx-14(RNAi)_upregulated_PA14
WBPaper00066204:CdCl2_upregulated_mRNA
WBPaper00066232:hsf-1(RNAi)_upregulated_ash-2
WBPaper00066232:hsf-1(RNAi)_upregulated_WT
WBPaper00031252:AIN-2_IP_enriched
WBPaper00032165:differentially_expressed_with_age_medoid_2
WBPaper00035227:heat_shock_regulated
WBPaper00036123:Cadmium_regulated
WBPaper00041939:control_vs_UVC-exposed_24h
WBPaper00041939:control_vs_UVC-exposed_48h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00042574:N2_OrsayVirus_upregulated
WBPaper00042574:rde-1(ne219)_OrsayVirus_upregulated
WBPaper00044535:male_upregulated
WBPaper00045401:N.parisii_34h_upregulated_N2
WBPaper00047070:xpa-1_UV_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_downregulated
WBPaper00051387:Triclosan_upregulated
Interaction (50)
Map_infoPositivePositive_cloneF26F2Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV25.0132
ReferenceWBPaper00053737
WBPaper00061319
WBPaper00062345
MethodGene