WormBase Tree Display for Gene: WBGene00009042

WBGene00009042 SMap: S_parent: Sequence: F22B5
  Identity: Version: 1
    Name: Sequence_name: F22B5.4
      Molecular_name: F22B5.4
        F22B5.4.1
        CE02199
        F22B5.4.2
      Other_name: CELE_F22B5.4 Accession_evidence: NDB BX284602
      Public_name: F22B5.4
    DB_info: Database: AceView gene 2I741
        WormQTL gene WBGene00009042
        WormFlux gene WBGene00009042
        NDB locus_tag CELE_F22B5.4
        NCBI gene 174348
        RefSeq protein NM_063380.6
        TREEFAM TREEFAM_ID TF317585
        TrEMBL UniProtAcc Q19708
        UniProt_GCRP UniProtAcc Q19708
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (37)
    RNASeq_FPKM (74)
    GO_annotation: 00065580
    Ortholog (30)
    Paralog: WBGene00009454 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to be located in membrane. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F22B5.4
    Corresponding_transcript: F22B5.4.1
      F22B5.4.2
    Other_sequence (75)
    Associated_feature: WBsf657970
      WBsf657971
      WBsf657972
      WBsf657973
      WBsf988737
      WBsf988738
      WBsf988739
      WBsf1012696
      WBsf1012697
      WBsf221743
  Experimental_info: RNAi_result: WBRNAi00013730 Inferred_automatically: RNAi_primary
      WBRNAi00045279 Inferred_automatically: RNAi_primary
      WBRNAi00031255 Inferred_automatically: RNAi_primary
      WBRNAi00098152 Inferred_automatically: RNAi_primary
      WBRNAi00060975 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1015952
      Expr1033942
      Expr1149209
      Expr2002850
      Expr2021068
    Drives_construct: WBCnstr00032503
    Construct_product: WBCnstr00032503
    Microarray_results (19)
    Expression_cluster: WBPaper00024375:Up_N2_vs_vhl-1
      WBPaper00031040:TGF-beta_adult_upregulated
      WBPaper00034761:hlh-30_downregulated
      WBPaper00036738:4uM_Heme_downregulated
      WBPaper00036738:500uM_Heme_downregulated
      WBPaper00037055:DAF-16_binding_DNA
      WBPaper00037682:sma-2_downregulated
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:A-class-motor-neurons_larva_enriched
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_larva_enriched
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:BAG-neuron_embryo_enriched
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:germline-precursors_blastula-embryo_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_larva_enriched
      WBPaper00037950:intestine_L1-larva_expressed
      WBPaper00037950:intestine_L2-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00038061:aldicarb_upregulated
      WBPaper00038438:E.faecalis_24hr_upregulated_TilingArray
      WBPaper00038438:S.marcescens_24hr_downregulated_RNAseq
      WBPaper00040560:hpl-2_embryo_upregulated
      WBPaper00041071:spe-44_downregulated
      WBPaper00044037:eat-2_upregulated
      WBPaper00044316:CH3HgCl_7.5uM_downregulated
      WBPaper00044578:reduced-humidity_downregulated_microarray
      WBPaper00044736:rising_dev_expression
      WBPaper00045420:fertilization_upregulated_transcript
      WBPaper00045521:Spermatogenic
      WBPaper00045774:clk-1_upregulated
      WBPaper00045861:set-2(ok952)_downregulated
      WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
      WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
      WBPaper00046509:htz-1(ok3099)_downregulated
      WBPaper00046805:csr-1(RNAi)_upregulated_Set1
      WBPaper00046805:P-granule-RNAi_upregulated_Set1
      WBPaper00048926:miaserin_upregulated_adult-day5
      WBPaper00048926:miaserin_upregulated_adult-day10
      WBPaper00048988:daf-16(mu86)_upregulated_neuron
      WBPaper00048988:neuron_expressed
      WBPaper00049920:Glucose-Diet_upregulated_hyl-2(tm2031)
      WBPaper00049920:Glucose-Diet_upregulated_N2
      WBPaper00049942:hsf-1(RNAi)_upregulated
      WBPaper00049954:BPA_downregulated
      WBPaper00050231:male_enriched
      WBPaper00050370:mys-1(RNAi)_L3_downregulated
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050496:RID_enriched
      WBPaper00050496:unc-39(hp701)_regulated
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00050726:starvation_regulated_LowSalt
      WBPaper00050801:DAF-16_dauer_regulome
      WBPaper00050859:upregulated_P-granule(-)GFP(+)_vs_control_day2-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day1-adult
      WBPaper00050859:upregulated_P-granule(-)GFP(-)_vs_control_day2-adult
      WBPaper00050990:arcade_intestinal-valve_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00052884:emb-4(hc60)_upregulated
      WBPaper00053094:adr-2(ok735)_neuron_upregulated
      WBPaper00053184:sma-2(rax5)_upregulated
      WBPaper00053184:sma-4(rax3)_upregulated
      WBPaper00053295:lin-22(icb38)_downregulated
      WBPaper00053295:lin-22(ot267)_downregulated
      WBPaper00053295:lin-22(ot269)_downregulated
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053308:NMD(-)_downregulated_SMD-2_non-binding_ClassIV
      WBPaper00053318:Aging_downregulated_mRNA_N2
      WBPaper00053318:mir-71(n4115)_downregulated_mRNA
      WBPaper00053321:lin-15B(RNAi)_downregulated_starved-L1_Truseq
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_fed-L1_Truseq
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_L1_SMARTseq
      WBPaper00053321:nos-1(gv5)nos-2(RNAi)_upregulated_starved-L1_Truseq
      WBPaper00053368:F.oxysporum_regulated
      WBPaper00053599:female_vs_male_downregulated
      WBPaper00053810:clk-1(qm30)_upregulated
      WBPaper00053810:isp-1(qm150)_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00054191:H3.3(null)_L1_downregulated
      WBPaper00054872:egl-9(sa307)_upregulated
      WBPaper00055354:Metformin_upregulated
      WBPaper00055354:Rifampicin-Allantoin_upregulated
      WBPaper00055354:Rifampicin_upregulated
      WBPaper00055482:pmt-2(RNAi)_upregulated
      WBPaper00055565:AVK_enriched
      WBPaper00055648:sperm_expressed
      WBPaper00055827:pfd-6(gk493446)_downregulated
      WBPaper00055941:nuo-6(qm200)_upregulated
      WBPaper00055971:nhl-2(ok818)_20C_downregulated
      WBPaper00055971:nhl-2(ok818)_25C_downregulated
      WBPaper00056034:pals-22(jy3)_upregulated
      WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
      WBPaper00056090:E.faecalis_upregulated_N2
      WBPaper00056161:male_enriched_siRNA
      WBPaper00056167:ifo-1(kc2)_downregulated
      WBPaper00056169:rrf-3(pk1426)_upregulated_embryo
      WBPaper00056290:hsp-6(mg585)_downregulated
      WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
      WBPaper00056731:human-amylin_downregulated
      WBPaper00056997:nmad-1(ok3133)_upregulated_germline_25C
      WBPaper00057068:numr-1(RNAi)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058691:sin-3(tm1276)_downregulated
      WBPaper00058948:npr-8(ok1439)_downregulated_OP50
      WBPaper00058948:PA14_downregulated
      WBPaper00059117:B.subtilis_upregulated
      WBPaper00059253:stearic-acid_upregulated
      WBPaper00059253:sucrose_upregulated
      WBPaper00059471:EGL-43_interacting
      WBPaper00059566:wdr-23(mac32)_upregulated
      WBPaper00059605:mut-16(pk710)_upregulated
      WBPaper00059664:srbc-48(ac23)_upregulated
      WBPaper00059728:5ug_cholesterol_upregulated
      WBPaper00059728:20ug_cholesterol_upregulated
      WBPaper00059739:hira-1(gk835598)_upregulated_L4
      WBPaper00059763:neuron_expressed
      WBPaper00060273:isp-1(qm150)_upregulated
      WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
      WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
      WBPaper00060399:CoCl2_6hr_upregulated_N2
      WBPaper00060399:pqm-1(ok485)_upregulated_CoCl2_6hr
      WBPaper00060434:pH4.33_vs_pH6.33_downrgulated
      WBPaper00060459:bcat-1(RNAi)_upregulated
      WBPaper00060661:sensory-neuron_enriched
      WBPaper00060683:hlh-11(ko1)_upregulated
      WBPaper00060764:swsn-1(os22ts)_downregulated
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00060909:atfs-1(cmh15)_upregulated
      WBPaper00060921:cat-2(e1112)_downregulated
      WBPaper00061081:E.faecalis_upregulated_N2
      WBPaper00061203:let-418(n3536)_upregulated
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061274:hypergravity_10xg_upregulated
      WBPaper00061274:hypergravity_15xg_upregulated
      WBPaper00061340:AIM
      WBPaper00061340:AIY
      WBPaper00061340:AIZ
      WBPaper00061340:AVG
      WBPaper00061340:BAG
      WBPaper00061340:DVA
      WBPaper00061340:I5
      WBPaper00061340:OLL
      WBPaper00061340:RIA
      WBPaper00061340:RIB
      WBPaper00061340:RIM
      WBPaper00061340:RMD
      WBPaper00061340:SMD
      WBPaper00061341:28C_24h_downregulated
      WBPaper00061409:neuronal-fzo-1(RNAi)_upregulated
      WBPaper00061424:Diet_MYb120_upregulated
      WBPaper00061479:hda-1(ne4752)_upregulated
      WBPaper00061479:prg-1(tm872)_upregulated
      WBPaper00061479:ubc-9(ne4833)_upregulated
      WBPaper00061527:syd-1_2945-unc-41_2170
      WBPaper00061530:nhr-49(e2144)_downregulated
      WBPaper00061651:AIA_enriched
      WBPaper00061651:ASJ_enriched
      WBPaper00061651:ASK_enriched
      WBPaper00061651:AVG_enriched
      WBPaper00061651:AVJ_enriched
      WBPaper00061651:BDU_enriched
      WBPaper00061651:DB01_enriched
      WBPaper00061651:DVC_enriched
      WBPaper00061651:I1_enriched
      WBPaper00061651:OLL_enriched
      WBPaper00061651:PVM_enriched
      WBPaper00061651:RIP_enriched
      WBPaper00061651:SMD_enriched
      WBPaper00061651:URB_enriched
      WBPaper00061651:VA_enriched
      WBPaper00061651:VB01_enriched
      WBPaper00061651:VB02_enriched
      WBPaper00061651:VB_enriched
      WBPaper00061699:daf-18(ok480)_upregulated
      WBPaper00062103:neuron_enriched
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00062520:qui-1(db104)_upregulated
      WBPaper00064005:starvation_downregulated_aptf-1(gk794)_mRNA
      WBPaper00064005:starvation_downregulated_N2_mRNA
      WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064502:nhr-23(kry61);spe-44(fx110)_downregulated
      WBPaper00064502:spe-44(fx110)_downregulated
      WBPaper00064716:paraquat_downregulated
      WBPaper00064769:him-17(me24)_downregulated
      WBPaper00065096:25C_vs_20C_downregulated
      WBPaper00065096:Day10_vs_Day1_downregulated
      WBPaper00065096:npr-8(ok1439)_upregulated_Day10_20C
      WBPaper00065581:hpk-1(pk1393)_upregulated
      WBPaper00065841:6_0
      WBPaper00065841:6_1
      WBPaper00065841:32_0
      WBPaper00065841:53_0
      WBPaper00065841:54_0
      WBPaper00065841:114_0
      WBPaper00065841:116_0
      WBPaper00065841:131_0
      WBPaper00065841:140_0
      WBPaper00065984:pals-17(syb3980)_upregulated
      WBPaper00065995:M.humicola-extract_downregulated_N2
      WBPaper00066038:mip-1(how5)_upregulated
      WBPaper00066085:hda-3(ok1991)_upregulated
      WBPaper00066093:E.coli-purE_upregulated
      WBPaper00066110:Doxorubicin_upregulated_diploid
      WBPaper00066110:tetraploid_vs_diploid_upregulated
      WBPaper00066232:ash-2(RNAi)_downregulated_WT
      cgc4386_cluster_2_5
      cgc4489_group_12
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00030839:Embryo_Pan_Neuronal
      WBPaper00030839:Larval_A_Class
      WBPaper00030839:Larval_Pan_Neuronal
      WBPaper00031003:0hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00031703:heme_responsive_6
      WBPaper00032165:differentially_expressed_with_age_medoid_2
      WBPaper00034661:AgNPs_downregulated
      WBPaper00035227:heat_shock_regulated
      WBPaper00036286:Pattern_E
      WBPaper00038231:Cry5B_1.5-fold_upregulated
      WBPaper00038231:Cry5B_2-fold_upregulated
      WBPaper00039866:ClassComp_daf-19_upregulated
      WBPaper00040210:Chlorpyrifos_Diazinon_24C_regulated
      WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
      WBPaper00040858:eQTL_regulated_developing
      WBPaper00040858:eQTL_regulated_juvenile
      WBPaper00040876:mir-35_downregulated
      WBPaper00040963:Q50_up
      WBPaper00040963:Q100_down
      WBPaper00040963:Q200_down
      WBPaper00040963:TA300_up
      WBPaper00041174:genotypic
      WBPaper00041174:genotypic_prime
      WBPaper00041906:I-3690_vs_OP50_3d
      WBPaper00041939:UVC-EtBr-exposed_vs_EtBr-exposed_3h
      WBPaper00045263:0.1mM-paraquat_downregulated
      WBPaper00045263:isp-1(qm150)_upregulated
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00046853:AOBr_M.aeruginosa-batch-culture_downregulated
      WBPaper00047070:N2_UV_downregulated
      WBPaper00047070:xpa-1_UV_downregulated
      WBPaper00053236:daf-16(mgDF50)_regulated_Starved
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      WBPaper00053550:daf-19(m86)_upregulated_3-fold-embryo
      WBPaper00053827:pyoverdine_upregulated
      WBPaper00055435:AuNPs_upregulated
      WBPaper00055435:MUA-AuNP-0.5_upregulated
      WBPaper00055435:MUA-AuNP-3_upregulated
      [cgc6390]:mixed_spermatogenesis-somatic
    Interaction: WBInteraction000420233
      WBInteraction000430122
      WBInteraction000501998
      WBInteraction000503031
      WBInteraction000503032
      WBInteraction000503033
      WBInteraction000520035
      WBInteraction000520036
  Map_info: Positive: Positive_clone: F22B5 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: II 0.800086
  Reference: WBPaper00028496
    WBPaper00031018
    WBPaper00031039
    WBPaper00036738
    WBPaper00046763
    WBPaper00058798
  Method: Gene