WormBase Tree Display for Gene: WBGene00009030

WBGene00009030 SMap: S_parent: Sequence: F21H7
  Identity: Version: 2
    Name: CGC_name: clec-233 Person_evidence: WBPerson2531
      Sequence_name: F21H7.4
      Molecular_name: F21H7.4
        F21H7.4.1
        CE15876
      Other_name: CELE_F21H7.4 Accession_evidence: NDB BX284605
      Public_name: clec-233
    DB_info: Database: AceView gene 5Q715
        WormQTL gene WBGene00009030
        WormFlux gene WBGene00009030
        NDB locus_tag CELE_F21H7.4
        Panther gene CAEEL|WormBase=WBGene00009030|UniProtKB=O45388
          family PTHR47517
        NCBI gene 180089
        RefSeq protein NM_074696.5
        TREEFAM TREEFAM_ID TF315870
        TrEMBL UniProtAcc O45388
        UniProt_GCRP UniProtAcc O45388
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 09 Oct 2007 15:40:27 WBPerson2970 Name_change: CGC_name: clec-233
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: clec
    Allele (68)
    RNASeq_FPKM (74)
    Ortholog (46)
    Paralog (126)
    Structured_description: Automated_description: Enriched in several structures, including germ line; head mesodermal cell; muscle cell; pharyngeal-intestinal valve cell; and rectal gland cell based on proteomic; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; glp-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by ten chemicals including manganese chloride; stavudine; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; C-type lectin-like; and C-type lectin fold. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F21H7.4
    Corresponding_transcript: F21H7.4.1
    Other_sequence: CSC02137_1
      FD515894.1
      CR05103
      CRC02006_1
    Associated_feature: WBsf655139
      WBsf662144
      WBsf662145
      WBsf662146
      WBsf233087
  Experimental_info: RNAi_result: WBRNAi00112635 Inferred_automatically: RNAi_primary
      WBRNAi00045257 Inferred_automatically: RNAi_primary
      WBRNAi00008678 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr4945
      Expr1010419
      Expr1033937
      Expr1149188
      Expr2010139
      Expr2028380
    Drives_construct: WBCnstr00012358
      WBCnstr00032511
    Construct_product: WBCnstr00032511
    Microarray_results (16)
    Expression_cluster (139)
    Interaction (63)
  Map_info: Map: V Position: 9.85735 Error: 0.001091
    Positive: Positive_clone: F21H7 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00031003
    WBPaper00031686
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene