WormBase Tree Display for Gene: WBGene00009030
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| WBGene00009030 | SMap | S_parent | Sequence | F21H7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | clec-233 | Person_evidence | WBPerson2531 | |||||
| Sequence_name | F21H7.4 | ||||||||
| Molecular_name | F21H7.4 | ||||||||
| F21H7.4.1 | |||||||||
| CE15876 | |||||||||
| Other_name | CELE_F21H7.4 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | clec-233 | ||||||||
| DB_info | Database | AceView | gene | 5Q715 | |||||
| WormQTL | gene | WBGene00009030 | |||||||
| WormFlux | gene | WBGene00009030 | |||||||
| NDB | locus_tag | CELE_F21H7.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00009030|UniProtKB=O45388 | |||||||
| family | PTHR47517 | ||||||||
| NCBI | gene | 180089 | |||||||
| RefSeq | protein | NM_074696.5 | |||||||
| TREEFAM | TREEFAM_ID | TF315870 | |||||||
| TrEMBL | UniProtAcc | O45388 | |||||||
| UniProt_GCRP | UniProtAcc | O45388 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Oct 2007 15:40:27 | WBPerson2970 | Name_change | CGC_name | clec-233 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | clec | ||||||||
| Allele (68) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (46) | |||||||||
| Paralog (126) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including germ line; head mesodermal cell; muscle cell; pharyngeal-intestinal valve cell; and rectal gland cell based on proteomic; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; glp-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by ten chemicals including manganese chloride; stavudine; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F21H7.4 | |||||||
| Corresponding_transcript | F21H7.4.1 | ||||||||
| Other_sequence | CSC02137_1 | ||||||||
| FD515894.1 | |||||||||
| CR05103 | |||||||||
| CRC02006_1 | |||||||||
| Associated_feature | WBsf655139 | ||||||||
| WBsf662144 | |||||||||
| WBsf662145 | |||||||||
| WBsf662146 | |||||||||
| WBsf233087 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00112635 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00045257 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00008678 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4945 | ||||||||
| Expr1010419 | |||||||||
| Expr1033937 | |||||||||
| Expr1149188 | |||||||||
| Expr2010139 | |||||||||
| Expr2028380 | |||||||||
| Drives_construct | WBCnstr00012358 | ||||||||
| WBCnstr00032511 | |||||||||
| Construct_product | WBCnstr00032511 | ||||||||
| Microarray_results (16) | |||||||||
| Expression_cluster (139) | |||||||||
| Interaction | WBInteraction000113788 | ||||||||
| WBInteraction000113834 | |||||||||
| WBInteraction000113880 | |||||||||
| WBInteraction000113929 | |||||||||
| WBInteraction000113980 | |||||||||
| WBInteraction000113981 | |||||||||
| WBInteraction000113982 | |||||||||
| WBInteraction000114059 | |||||||||
| WBInteraction000116402 | |||||||||
| WBInteraction000116447 | |||||||||
| WBInteraction000116490 | |||||||||
| WBInteraction000116532 | |||||||||
| WBInteraction000116574 | |||||||||
| WBInteraction000116575 | |||||||||
| WBInteraction000116576 | |||||||||
| WBInteraction000116577 | |||||||||
| WBInteraction000116578 | |||||||||
| WBInteraction000116579 | |||||||||
| WBInteraction000116580 | |||||||||
| WBInteraction000116581 | |||||||||
| WBInteraction000116582 | |||||||||
| WBInteraction000116583 | |||||||||
| WBInteraction000116584 | |||||||||
| WBInteraction000116585 | |||||||||
| WBInteraction000116586 | |||||||||
| WBInteraction000116587 | |||||||||
| WBInteraction000116588 | |||||||||
| WBInteraction000116589 | |||||||||
| WBInteraction000116590 | |||||||||
| WBInteraction000116591 | |||||||||
| WBInteraction000116592 | |||||||||
| WBInteraction000116593 | |||||||||
| WBInteraction000116594 | |||||||||
| WBInteraction000116595 | |||||||||
| WBInteraction000116596 | |||||||||
| WBInteraction000116597 | |||||||||
| WBInteraction000116598 | |||||||||
| WBInteraction000116599 | |||||||||
| WBInteraction000116600 | |||||||||
| WBInteraction000116601 | |||||||||
| WBInteraction000116602 | |||||||||
| WBInteraction000116603 | |||||||||
| WBInteraction000116604 | |||||||||
| WBInteraction000116605 | |||||||||
| WBInteraction000116606 | |||||||||
| WBInteraction000116607 | |||||||||
| WBInteraction000116608 | |||||||||
| WBInteraction000116609 | |||||||||
| WBInteraction000116610 | |||||||||
| WBInteraction000116611 | |||||||||
| WBInteraction000116612 | |||||||||
| WBInteraction000116613 | |||||||||
| WBInteraction000116614 | |||||||||
| WBInteraction000123179 | |||||||||
| WBInteraction000152832 | |||||||||
| WBInteraction000159123 | |||||||||
| WBInteraction000159124 | |||||||||
| WBInteraction000166709 | |||||||||
| WBInteraction000169892 | |||||||||
| WBInteraction000173062 | |||||||||
| WBInteraction000336335 | |||||||||
| WBInteraction000336415 | |||||||||
| WBInteraction000564497 | |||||||||
| Map_info | Map | V | Position | 9.85735 | Error | 0.001091 | |||
| Positive | Positive_clone | F21H7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00031003 | ||||||||
| WBPaper00031686 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
