WormBase Tree Display for Gene: WBGene00009030
expand all nodes | collapse all nodes | view schema
| WBGene00009030 | SMap | S_parent | Sequence | F21H7 | |||
|---|---|---|---|---|---|---|---|
| Identity (6) | |||||||
| Gene_info | Biotype | SO:0001217 | |||||
| Gene_class | clec | ||||||
| Allele (68) | |||||||
| RNASeq_FPKM (74) | |||||||
| Ortholog (46) | |||||||
| Paralog (126) | |||||||
| Structured_description | Automated_description | Enriched in several structures, including germ line; head mesodermal cell; muscle cell; pharyngeal-intestinal valve cell; and rectal gland cell based on proteomic; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; glp-1; and hsf-1 based on microarray and RNA-seq studies. Is affected by ten chemicals including manganese chloride; stavudine; and allantoin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin-like/link domain superfamily; C-type lectin-like; and C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||
| Curator_confirmed | WBPerson324 | ||||||
| WBPerson37462 | |||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
| Molecular_info | Corresponding_CDS | F21H7.4 | |||||
| Corresponding_transcript | F21H7.4.1 | ||||||
| Other_sequence | CSC02137_1 | ||||||
| FD515894.1 | |||||||
| CR05103 | |||||||
| CRC02006_1 | |||||||
| Associated_feature | WBsf655139 | ||||||
| WBsf662144 | |||||||
| WBsf662145 | |||||||
| WBsf662146 | |||||||
| WBsf233087 | |||||||
| Experimental_info | RNAi_result | WBRNAi00112635 | Inferred_automatically | RNAi_primary | |||
| WBRNAi00045257 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00008678 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr4945 | ||||||
| Expr1010419 | |||||||
| Expr1033937 | |||||||
| Expr1149188 | |||||||
| Expr2010139 | |||||||
| Expr2028380 | |||||||
| Drives_construct | WBCnstr00012358 | ||||||
| WBCnstr00032511 | |||||||
| Construct_product | WBCnstr00032511 | ||||||
| Microarray_results (16) | |||||||
| Expression_cluster (139) | |||||||
| Interaction (63) | |||||||
| Map_info | Map | V | Position | 9.85735 | Error | 0.001091 | |
| Positive | Positive_clone | F21H7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
| Pseudo_map_position | |||||||
| Reference | WBPaper00031003 | ||||||
| WBPaper00031686 | |||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
| Method | Gene |
