WormBase Tree Display for Gene: WBGene00008578
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WBGene00008578 | SMap | S_parent | Sequence | F08G2 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F08G2.7 | |||||||
Molecular_name | F08G2.7 | ||||||||
F08G2.7.1 | |||||||||
CE19779 | |||||||||
Other_name | CELE_F08G2.7 | Accession_evidence | NDB | BX284602 | |||||
Public_name | F08G2.7 | ||||||||
DB_info | Database | AceView | gene | 2O128 | |||||
WormQTL | gene | WBGene00008578 | |||||||
WormFlux | gene | WBGene00008578 | |||||||
NDB | locus_tag | CELE_F08G2.7 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00008578|UniProtKB=Q9XVA2 | |||||||
family | PTHR37960 | ||||||||
NCBI | gene | 175036 | |||||||
RefSeq | protein | NM_064502.6 | |||||||
TREEFAM | TREEFAM_ID | TF316201 | |||||||
TrEMBL | UniProtAcc | Q9XVA2 | |||||||
UniProt_GCRP | UniProtAcc | Q9XVA2 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (150) | |||||||||
Strain | WBStrain00031842 | ||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (21) | |||||||||
Paralog | WBGene00045357 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WBGene00015899 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00010051 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Enriched in several structures, including ABalaaaarl; ABalaaaarr; ABalpapaap; ABarappaap; and muscle cell based on single-cell RNA-seq studies. Is affected by several genes including daf-2; daf-12; and sek-1 based on tiling array; microarray; and RNA-seq studies. Is affected by Zidovudine; Tunicamycin; and paraquat based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F08G2.7 | |||||||
Corresponding_transcript | F08G2.7.1 | ||||||||
Other_sequence | DA03435 | ||||||||
Associated_feature (14) | |||||||||
Experimental_info | RNAi_result | WBRNAi00012926 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00044050 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00030667 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00023405 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00086540 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr11711 | ||||||||
Expr1014370 | |||||||||
Expr1033737 | |||||||||
Expr1148015 | |||||||||
Expr2002310 | |||||||||
Expr2020529 | |||||||||
Drives_construct | WBCnstr00032861 | ||||||||
Construct_product | WBCnstr00032861 | ||||||||
Microarray_results | SMD_F08G2.7 | ||||||||
179387_s_at | |||||||||
A_12_P103474 | |||||||||
Aff_F08G2.7 | |||||||||
GPL13394_WBGene00008578 | |||||||||
GPL13914_F08G2.7 | |||||||||
GPL14144_F08G2.7_1288-1347_0.941_2_A | |||||||||
GPL14144_F08G2.7_13-72_0.836_40_C | |||||||||
GPL14144_F08G2.7_631-690_0.908_11_B | |||||||||
GPL19516_CGZ0014965 | |||||||||
GPL21109_F08G2.7 | |||||||||
GPL3518_CE19779 | |||||||||
GPL8304_CE_WBGene00008578_A | |||||||||
GPL8304_CE_WBGene00008578_C | |||||||||
GPL8673_F08G2_7P00367 | |||||||||
GPL8673_F08G2_7P00944 | |||||||||
GPL8673_F08G2_7P01245 | |||||||||
GPL9450_F08G2.7 | |||||||||
cea2.p.35651 | |||||||||
Expression_cluster (81) | |||||||||
Interaction | WBInteraction000030603 | ||||||||
WBInteraction000384447 | |||||||||
WBInteraction000542945 | |||||||||
WBInteraction000542947 | |||||||||
WBInteraction000547711 | |||||||||
Map_info | Positive | Positive_clone | F08G2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | 20.3919 | |||||||
Reference | WBPaper00029005 | ||||||||
WBPaper00060275 | |||||||||
Method | Gene |