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WormBase Tree Display for Gene: WBGene00008578

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Name Class

WBGene00008578SMapS_parentSequenceF08G2
Identity (6)
Gene_infoBiotypeSO:0001217
Allele (150)
StrainWBStrain00031842
RNASeq_FPKM (74)
Ortholog (21)
ParalogWBGene00045357Caenorhabditis elegansFrom_analysisTreeFam
Panther
WBGene00015899Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00010051Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
Structured_descriptionAutomated_descriptionEnriched in several structures, including ABalaaaarl; ABalaaaarr; ABalpapaap; ABarappaap; and muscle cell based on single-cell RNA-seq studies. Is affected by several genes including daf-2; daf-12; and sek-1 based on tiling array; microarray; and RNA-seq studies. Is affected by Zidovudine; Tunicamycin; and paraquat based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSF08G2.7
Corresponding_transcriptF08G2.7.1
Other_sequenceDA03435
Associated_feature (14)
Experimental_infoRNAi_resultWBRNAi00012926Inferred_automaticallyRNAi_primary
WBRNAi00044050Inferred_automaticallyRNAi_primary
WBRNAi00030667Inferred_automaticallyRNAi_primary
WBRNAi00023405Inferred_automaticallyRNAi_primary
WBRNAi00086540Inferred_automaticallyRNAi_primary
Expr_patternExpr11711
Expr1014370
Expr1033737
Expr1148015
Expr2002310
Expr2020529
Drives_constructWBCnstr00032861
Construct_productWBCnstr00032861
Microarray_resultsSMD_F08G2.7
179387_s_at
A_12_P103474
Aff_F08G2.7
GPL13394_WBGene00008578
GPL13914_F08G2.7
GPL14144_F08G2.7_1288-1347_0.941_2_A
GPL14144_F08G2.7_13-72_0.836_40_C
GPL14144_F08G2.7_631-690_0.908_11_B
GPL19516_CGZ0014965
GPL21109_F08G2.7
GPL3518_CE19779
GPL8304_CE_WBGene00008578_A
GPL8304_CE_WBGene00008578_C
GPL8673_F08G2_7P00367
GPL8673_F08G2_7P00944
GPL8673_F08G2_7P01245
GPL9450_F08G2.7
cea2.p.35651
Expression_cluster (81)
InteractionWBInteraction000030603
WBInteraction000384447
WBInteraction000542945
WBInteraction000542947
WBInteraction000547711
Map_infoPositivePositive_cloneF08G2Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII20.3919
ReferenceWBPaper00029005
WBPaper00060275
MethodGene