WormBase Tree Display for Gene: WBGene00008506
expand all nodes | collapse all nodes | view schema
| WBGene00008506 | SMap | S_parent | Sequence | F01G10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tkt-1 | Person_evidence | WBPerson2601 | |||||
| Sequence_name | F01G10.1 | ||||||||
| Molecular_name | F01G10.1 | ||||||||
| F01G10.1.1 | |||||||||
| CE09163 | |||||||||
| Other_name | CELE_F01G10.1 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | tkt-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 18 Mar 2009 15:16:46 | WBPerson9133 | Name_change | CGC_name | tkt-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tkt | ||||||||
| Allele (24) | |||||||||
| Strain | WBStrain00003184 | ||||||||
| WBStrain00002783 | |||||||||
| WBStrain00033277 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00030651 | ||||||||
| 00030652 | |||||||||
| 00030653 | |||||||||
| 00030654 | |||||||||
| 00030655 | |||||||||
| 00030656 | |||||||||
| 00116408 | |||||||||
| Ortholog (49) | |||||||||
| Paralog | WBGene00006518 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| WBGene00015413 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Concise_description | tkt-1 encodes an ortholog of the human gene TRANSKETOLASE (TKT; OMIM:606781), which when mutated leads to Wernicke-Korsakoff syndrome (OMIM:277730). | Paper_evidence | WBPaper00004637 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson1823 | |||||||||
| WBPerson567 | |||||||||
| Date_last_updated | 14 Dec 2009 00:00:00 | ||||||||
| Automated_description | Predicted to enable thiamine pyrophosphate binding activity and transketolase activity. Predicted to be located in mitochondrion. Is an ortholog of human TKT (transketolase) and TKTL2 (transketolase like 2). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F01G10.1 | |||||||
| Corresponding_transcript | F01G10.1.1 | ||||||||
| Other_sequence (240) | |||||||||
| Associated_feature | WBsf646294 | ||||||||
| WBsf660573 | |||||||||
| WBsf981811 | |||||||||
| WBsf997578 | |||||||||
| WBsf1018062 | |||||||||
| WBsf228967 | |||||||||
| WBsf228968 | |||||||||
| Experimental_info | RNAi_result (43) | ||||||||
| Expr_pattern (12) | |||||||||
| Drives_construct | WBCnstr00003310 | ||||||||
| WBCnstr00004574 | |||||||||
| WBCnstr00012514 | |||||||||
| WBCnstr00032914 | |||||||||
| Construct_product | WBCnstr00032914 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (179) | |||||||||
| Interaction (166) | |||||||||
| Map_info | Map | IV | Position | 4.56387 | |||||
| Positive | Positive_clone | F01G10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (13) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
