WormBase Tree Display for Gene: WBGene00008385
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| WBGene00008385 | SMap | S_parent | Sequence | D1081 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | lotr-1 | Person_evidence | WBPerson2113 | |||||
| Sequence_name | D1081.7 | ||||||||
| Molecular_name | D1081.7 | ||||||||
| D1081.7.1 | |||||||||
| CE41211 | |||||||||
| Other_name | CELE_D1081.7 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | lotr-1 | ||||||||
| DB_info | Database | AceView | gene | 1J65 | |||||
| WormQTL | gene | WBGene00008385 | |||||||
| WormFlux | gene | WBGene00008385 | |||||||
| NDB | locus_tag | CELE_D1081.7 | |||||||
| NCBI | gene | 172638 | |||||||
| RefSeq | protein | NM_001128966.4 | |||||||
| TrEMBL | UniProtAcc | A5Z2T6 | |||||||
| UniProt_GCRP | UniProtAcc | A5Z2T6 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 02 Jan 2021 22:55:32 | WBPerson1983 | Name_change | CGC_name | lotr-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | lotr | ||||||||
| Allele (34) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP1929 | ||||||||
| Ortholog (19) | |||||||||
| Structured_description | Automated_description | Enriched in ABalaaaala; ABalaapaaa; germ line; germline precursor cell; and head mesodermal cell based on proteomic; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray; RNA-seq; and proteomic studies. Is affected by fifteen chemicals including rotenone; manganese chloride; and D-glucose based on RNA-seq; proteomic; and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | D1081.7 | |||||||
| Corresponding_CDS_history | D1081.7a:wp246 | ||||||||
| Corresponding_transcript | D1081.7.1 | ||||||||
| Other_sequence | CBC07277_1 | ||||||||
| CBC08291_1 | |||||||||
| CRC00521_1 | |||||||||
| CBC04203_1 | |||||||||
| CR10591 | |||||||||
| Associated_feature (11) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00030362 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00066542 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003275 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00066729 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043416 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00007769 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00077823 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1023645 | ||||||||
| Expr1033633 | |||||||||
| Expr1147403 | |||||||||
| Expr2002048 | |||||||||
| Expr2020270 | |||||||||
| Drives_construct | WBCnstr00033006 | ||||||||
| Construct_product | WBCnstr00033006 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (193) | |||||||||
| Interaction (329) | |||||||||
| Map_info | Positive | Positive_clone | D1081 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | I | 2.86353 | |||||||
| Reference | WBPaper00057898 | ||||||||
| WBPaper00063892 | |||||||||
| WBPaper00064163 | |||||||||
| Method | Gene |
