WormBase Tree Display for Gene: WBGene00008385
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WBGene00008385 | SMap | S_parent | Sequence | D1081 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | lotr-1 | Person_evidence | WBPerson2113 | |||
Sequence_name | D1081.7 | ||||||
Molecular_name | D1081.7 | ||||||
D1081.7.1 | |||||||
CE41211 | |||||||
Other_name | CELE_D1081.7 | Accession_evidence | NDB | BX284601 | |||
Public_name | lotr-1 | ||||||
DB_info | Database | AceView | gene | 1J65 | |||
WormQTL | gene | WBGene00008385 | |||||
WormFlux | gene | WBGene00008385 | |||||
NDB | locus_tag | CELE_D1081.7 | |||||
NCBI | gene | 172638 | |||||
RefSeq | protein | NM_001128966.4 | |||||
TrEMBL | UniProtAcc | A5Z2T6 | |||||
UniProt_GCRP | UniProtAcc | A5Z2T6 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | lotr | ||||||
Allele (34) | |||||||
RNASeq_FPKM (74) | |||||||
Contained_in_operon | CEOP1929 | ||||||
Ortholog (19) | |||||||
Structured_description | Automated_description | Enriched in ABalaaaala; ABalaapaaa; germ line; germline precursor cell; and head mesodermal cell based on proteomic; tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray; RNA-seq; and proteomic studies. Is affected by fifteen chemicals including rotenone; manganese chloride; and D-glucose based on RNA-seq; proteomic; and microarray studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | D1081.7 | |||||
Corresponding_CDS_history | D1081.7a:wp246 | ||||||
Corresponding_transcript | D1081.7.1 | ||||||
Other_sequence | CBC07277_1 | ||||||
CBC08291_1 | |||||||
CRC00521_1 | |||||||
CBC04203_1 | |||||||
CR10591 | |||||||
Associated_feature (11) | |||||||
Experimental_info | RNAi_result | WBRNAi00030362 | Inferred_automatically | RNAi_primary | |||
WBRNAi00066542 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00003275 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00066729 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00043416 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00007769 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00077823 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1023645 | ||||||
Expr1033633 | |||||||
Expr1147403 | |||||||
Expr2002048 | |||||||
Expr2020270 | |||||||
Drives_construct | WBCnstr00033006 | ||||||
Construct_product | WBCnstr00033006 | ||||||
Microarray_results (21) | |||||||
Expression_cluster (193) | |||||||
Interaction (329) | |||||||
Map_info | Positive | Positive_clone | D1081 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | I | 2.86353 | |||||
Reference | WBPaper00057898 | ||||||
WBPaper00063892 | |||||||
WBPaper00064163 | |||||||
Method | Gene |