WormBase Tree Display for Gene: WBGene00008345

WBGene00008345 SMap: S_parent: Sequence: C56A3
  Identity: Version: 1
    Name: Sequence_name: C56A3.6
      Molecular_name (18)
      Other_name: CELE_C56A3.6 Accession_evidence: NDB BX284605
      Public_name: C56A3.6
    DB_info: Database: AceView gene 5O34
        WormQTL gene WBGene00008345
        WormFlux gene WBGene00008345
        NDB locus_tag CELE_C56A3.6
        Panther gene CAEEL|WormBase=WBGene00008345|UniProtKB=Q18874
          family PTHR12294
        NCBI gene 179837
        RefSeq protein NM_001269592.3
            NM_001269590.3
            NM_001373146.2
            NM_001269591.3
            NM_001269593.3
            NM_001373147.2
        TREEFAM TREEFAM_ID TF320374
        TrEMBL UniProtAcc D9N139
            A0A486WVK8
            D7SFN6
            A0A486WWU3
            D9N138
            Q18874
        UniProt_GCRP UniProtAcc Q18874
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (84)
    RNASeq_FPKM (74)
    GO_annotation: 00003587
      00003588
      00003589
      00003590
      00116270
      00116271
    Ortholog (39)
    Paralog: WBGene00013462 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable calcium ion binding activity. Predicted to be involved in calcium import into the mitochondrion and mitochondrial calcium ion homeostasis. Predicted to be part of uniplex complex. Is an ortholog of human MICU3 (mitochondrial calcium uptake family member 3). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C56A3.6a
      C56A3.6b
      C56A3.6c
      C56A3.6d
      C56A3.6e
      C56A3.6f
    Corresponding_CDS_history: C56A3.6:wp90
      C56A3.6:wp188
    Corresponding_transcript: C56A3.6a.1
      C56A3.6b.1
      C56A3.6c.1
      C56A3.6d.1
      C56A3.6e.1
      C56A3.6f.1
    Other_sequence (46)
    Associated_feature: WBsf653321
      WBsf653322
      WBsf669598
      WBsf669599
      WBsf669600
      WBsf1001842
      WBsf1020735
      WBsf1020736
  Experimental_info: RNAi_result: WBRNAi00082470 Inferred_automatically: RNAi_primary
      WBRNAi00030193 Inferred_automatically: RNAi_primary
      WBRNAi00012451 Inferred_automatically: RNAi_primary
      WBRNAi00082592 Inferred_automatically: RNAi_primary
      WBRNAi00043256 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1012906
      Expr1033615
      Expr1147236
      Expr2001970
      Expr2020194
    Drives_construct: WBCnstr00033037
    Construct_product: WBCnstr00033037
    Microarray_results (25)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00033065:cyc-1(RNAi)_upregulated
      WBPaper00037055:DAF-16_binding_DNA
      WBPaper00037946:EGL-5_interacting
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00037950:hypodermis_L3-L4-larva_expressed
      WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
      WBPaper00041370:spg-7(RNAi)_upregulated_atfs-1_dependent
      WBPaper00044736:flat_dev_expression
      WBPaper00045521:Gender_Neutral
      WBPaper00045974:NSM_enriched_totalRNA_RNAseq
      WBPaper00048923:Aging_regulated
      WBPaper00048988:neuron_expressed
      WBPaper00049545:jmjd-3.1(+)_downregulated
      WBPaper00050344:AFD-neuron_enriched
      WBPaper00050344:PLM-neuron_enriched
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:NMDA-neuron_expressed
      WBPaper00051039:germline_enriched
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053289:DREAM-target
      WBPaper00053302:stavudine_24h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053321:embryo-to-L1_upregulated_nos-1(gv5)nos-2(RNAi)_SMARTseq
      WBPaper00053388:dauer_regulated_Cluster4
      WBPaper00053810:daf-2(e1370)_upregulated
      WBPaper00053810:isp-1(qm150)_upregulated
      WBPaper00053810:nuo-6(qm200)_upregulated
      WBPaper00055354:Rifampicin-Psora_upregulated
      WBPaper00055648:germline_expressed
      WBPaper00056471:S.aureus-4h_upregulated_N2
      WBPaper00058598:sin-3(tm1276)_downregulated
      WBPaper00058691:cfp-1(tm6369)_downregulated
      WBPaper00058725:sftb-1(cer6)_upregulated
      WBPaper00058725:sftb-1(cer39)_upregulated
      WBPaper00059471:EGL-43_interacting
      WBPaper00059763:neuron_expressed
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061203:sin-3(tm1276)_upregulated
      WBPaper00061203:spr-1(ok2144)_upregulated
      WBPaper00061340:BWM_far_posterior
      WBPaper00061527:lst-4_22151-F46F11.6_12556
      WBPaper00061651:RMF_enriched
      WBPaper00061699:daf-18(ok480)_downregulated
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00062498:PPM-1.D_interacting
      WBPaper00064071:NHR-49_interacting
      WBPaper00064716:paraquat_upregulated
      WBPaper00065975:P-body_vs_WholeAnimal_depleted
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00031003:hlh_1_enriched
      WBPaper00032948:StarveUp2
      WBPaper00035084:embryo_enriched_AIN-2_IP
      WBPaper00035504:daf-2(e1370)_upregulated
      WBPaper00035905:FBF-1_Associated
      WBPaper00036286:Pattern_B
      WBPaper00036286:Pattern_H
      WBPaper00037147:heatshock_upregulated
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00040858:eQTL_regulated_reproductive
      WBPaper00041002:HF_3d_2.0mM_Down
      WBPaper00041370:spg-7(RNAi)_upregulated
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053236:Starvation_regulated_N2
      WBPaper00057098:SiO2-nanoparticles_upregulated
      [cgc5767]:expression_class_E
      [cgc5767]:expression_class_E_pi(101_min)
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_MD
      [cgc5767]:expression_class_MDE
      [cgc5767]:expression_class_MD_pd(41_min)
      [cgc5767]:expression_class_ME
  Map_info: Positive: Positive_clone: C56A3 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: V 5.44777
  Reference: WBPaper00038491
    WBPaper00055090
  Method: Gene