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WormBase Tree Display for Gene: WBGene00008234

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Name Class

WBGene00008234SMapS_parentSequenceC50F4
IdentityVersion1
NameSequence_nameC50F4.9
Molecular_nameC50F4.9
C50F4.9.1
CE40250
Other_nameCELE_C50F4.9Accession_evidenceNDBBX284605
Public_nameC50F4.9
DB_infoDatabaseAceViewgene5K2
WormQTLgeneWBGene00008234
WormFluxgeneWBGene00008234
NDBlocus_tagCELE_C50F4.9
NCBIgene183680
RefSeqproteinNM_073053.3
TrEMBLUniProtAccQ18744
UniProt_GCRPUniProtAccQ18744
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (18)
RNASeq_FPKM (74)
GO_annotation00062175
Ortholog (21)
Structured_descriptionAutomated_descriptionInvolved in innate immune response.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC50F4.9
Corresponding_CDS_historyC50F4.9:wp159
Corresponding_transcriptC50F4.9.1
Associated_featureWBsf1000926
WBsf1000927
Experimental_infoRNAi_resultWBRNAi00042951Inferred_automaticallyRNAi_primary
WBRNAi00012241Inferred_automaticallyRNAi_primary
WBRNAi00030049Inferred_automaticallyRNAi_primary
Expr_patternExpr1013849
Expr1146918
Expr2001839
Expr2020065
Drives_constructWBCnstr00033129
Construct_productWBCnstr00033129
Microarray_results (16)
Expression_clusterWBPaper00027339:daf-12(rh273)_downregulated
WBPaper00032425:down_in_zfp-1
WBPaper00033065:cyc-1(RNAi)_upregulated
WBPaper00033070:Elbe_downregulated
WBPaper00033070:Rhine_downregulated
WBPaper00036375:enriched_in_PVD_OLL
WBPaper00037682:sma-2_downregulated
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:coelomocytes_L2-larva_expressed
WBPaper00037950:dopaminergic-neurons_L1-larva_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:intestine_larva_enriched
WBPaper00037950:pharyngeal-muscle_L1-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00038168:lin-15B(n744)_upregulated
WBPaper00038438:E.faecalis_24hr_downregulated_RNAseq
WBPaper00038438:Harposporium_24hr_upregulated_RNAseq
WBPaper00038438:P.lumniescens_24hr_upregulated_TilingArray
WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
WBPaper00041370:spg-7(RNAi)_upregulated_atfs-1_dependent
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00042477:rsr-2(RNAi)_downregulated_RNAseq
WBPaper00042561:smgl-1(RNAi)_downregulated
WBPaper00044030:nhr-8(hd117)_upregulated
WBPaper00044736:flat_dev_expression
WBPaper00045050:csr-1(hypomorph)_upregulated
WBPaper00045314:S.aureus-induced_N2
WBPaper00045390:tunicamycin_downregulated
WBPaper00045390:ubc-9(RNAi)_downregulated
WBPaper00045861:wdr-5(ok1417)_upregulated
WBPaper00046121:ecdoderm_unique
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_6h
WBPaper00046497:B.thuringiensis_0.1mix_upregulated_12h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_6h
WBPaper00046497:B.thuringiensis_0.5mix_upregulated_12h
WBPaper00049498:npr-1(ur89)_regulated_5
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00050096:P.aeruginosa_upregulated
WBPaper00050370:dpy-21(e428)_L3_upregulated
WBPaper00050488:20C_vs_25C_regulated_mir-34(gk437)_adult
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050990:arcade_intestinal-valve_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00051265:F4_morc-1(tm6048)_downregulated
WBPaper00052884:emb-4(hc60)_upregulated
WBPaper00053184:sma-2(rax5)_upregulated
WBPaper00053184:sma-4(rax3)_upregulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053318:Aging_upregulated_mRNA_N2
WBPaper00053318:mir-71(n4115)_upregulated_mRNA
WBPaper00053606:N2_vs_elt-2(ca15);elt-7(tm840)_upregulated
WBPaper00053606:N2_vs_elt-2(ca15)_upregulated
WBPaper00053771:up_at_24h-NaCl
WBPaper00053810:daf-2(e1370)_upregulated
WBPaper00053810:nuo-6(qm200)_upregulated
WBPaper00055013:hmg-3(bar24)_upregulated
WBPaper00055354:eat-2(ad1116)_downregulated
WBPaper00055354:Psora-Allantoin_downregulated
WBPaper00055354:Psora_downregulated
WBPaper00055354:Rapamycin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Metformin_downregulated
WBPaper00055354:Rapamycin-Rifampicin-Allantoin_downregulated
WBPaper00055354:Rapamycin-Rifampicin_downregulated
WBPaper00055354:Rapamycin_downregulated
WBPaper00055354:Rifampicin-Allantoin_downregulated
WBPaper00055354:Rifampicin-Psora_downregulated
WBPaper00055354:Rifampicin_downregulated
WBPaper00055827:pfd-6(gk493446)_upregulated
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055941:nuo-6(qm200);atfs-1(gk3094)_upregulated
WBPaper00055941:nuo-6(qm200)_upregulated
WBPaper00055971:nhl-2(ok818)_25C_downregulated
WBPaper00056090:E.faecalis_upregulated_hpx-2(dg047)
WBPaper00056090:E.faecalis_upregulated_N2
WBPaper00056167:ifo-1(kc2)_downregulated
WBPaper00056275:P.aeruginosa_upregulated
WBPaper00056586:kri-1(ok1251)_upregulated
WBPaper00056826:SGP_biased
WBPaper00057006:DietaryRestriction_downregulated
WBPaper00058711:paraquat_downregulated
WBPaper00058711:skn-1(lax188)_upregulated
WBPaper00058711:wdr-5(ok1417)_downregulated
WBPaper00058725:sftb-1(cer6)_upregulated
WBPaper00058725:sftb-1(cer39)_upregulated
WBPaper00058948:PA14_downregulated
WBPaper00059117:B.subtilis_upregulated
WBPaper00059537:ngn-1(ok2200)_upregulated
WBPaper00059664:srbc-48(ac23)_upregulated
WBPaper00059754:C.neoformans_H99_upregulated
WBPaper00059754:E.faecalis_OG1RF_upregulated
WBPaper00059754:P.aeruginosa_PA14_upregulated
WBPaper00059839:S.maltophilia_regulated
WBPaper00060014:set-2(zr2012)_upregulated
WBPaper00060358:B.thuringiensis_non-pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060358:B.thuringiensis_pathogen_regulated_N2
WBPaper00060661:sensory-neuron_enriched
WBPaper00060911:prx-5(RNAi)_upregulated_mRNA
WBPaper00061081:E.faecalis_upregulated_N2
WBPaper00061081:E.faecalis_upregulated_skpo-1(ok1640)
WBPaper00061340:AVL
WBPaper00061340:CAN
WBPaper00061340:OLL
WBPaper00061341:28C_24h_upregulated
WBPaper00061341:28C_48h_upregulated
WBPaper00061405:S.aureus_upregulated_starvation
WBPaper00061527:W01F3.2_1554-Y106G6D.8
WBPaper00061651:VC_4_5_enriched
WBPaper00061753:csr-1(tor159)_upregulated_25C
WBPaper00062159:hda-2(ok1479)_upregulated
WBPaper00062193:daf-16(RNAi)_downregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062440:crh-1(n3315)_downregulated
WBPaper00062440:crh-1(syb385)_downregulated
WBPaper00062446:nhr-8(hd117)_upregulated
WBPaper00062590:Aging_upregulated_intestine
WBPaper00062672:let-418(n3536)dcp-66(RNAi)_upregulated
WBPaper00062684:pathogen_upregulated_N2
WBPaper00064088:Day-1-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064107:lin-35(n745)_upregulated
WBPaper00064156:lipl-4(overexpress)_upregulated
WBPaper00064158:xpo-1(RNAi)_upregulated
WBPaper00064403:Heat-killed-E.Coli_upregulated
WBPaper00064637:cox-5B(RNAi)_upregulated
WBPaper00064850:glh-1(sam65)_upregulated
WBPaper00064871:PA14_upregulated_AWA
WBPaper00065096:25C_vs_20C_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065581:hpk-1(pk1393)_downregulated
WBPaper00065623:159
WBPaper00065734:unc-25(e156)_upregulated
WBPaper00065835:Day5_vs_Day1_upregulated
WBPaper00065835:Day11_vs_Day1_upregulated
WBPaper00065841:7_3
WBPaper00065841:38_0
WBPaper00065841:38_3
WBPaper00065841:62_0
WBPaper00065841:65_0
WBPaper00065841:68_0
WBPaper00065841:96_0
WBPaper00065841:105_0
WBPaper00065841:126_0
WBPaper00065841:131_0
WBPaper00065841:135_0
WBPaper00065841:145_0
WBPaper00065993:glp-1(e2141)_upregulated
WBPaper00066232:hsf-1(RNAi)_upregulated_WT
cgc4386_cluster_4_3
cgc4489_group_9
WBPaper00025141:N2_Expressed_Genes
WBPaper00027722:Microbacterium_nematophilum_upregulated
WBPaper00028789:PA14_vs_gacA_upregulated_4hr
WBPaper00028789:PA14_vs_gacA_upregulated_8hr
WBPaper00028789:PA14_vs_OP50_upregulated_4hr
WBPaper00028789:PA14_vs_OP50_upregulated_8hr
WBPaper00035227:heat_shock_regulated
WBPaper00035560:ahr-1_upregulated
WBPaper00035873:osm-11_regulated
WBPaper00036286:Pattern_D
WBPaper00036464:S.aureus-RN6390_regulated
WBPaper00037695:WC_5-day
WBPaper00038172:tax-6null_up_regulated
WBPaper00038231:Cry5B_1.5-fold_upregulated
WBPaper00038231:Cry5B_2-fold_upregulated
WBPaper00038304:octr-1_regulated
WBPaper00039851:HK_C_albicans_vs_HK_OP50
WBPaper00039851:Live_C_albicans_vs_HK_OP50
WBPaper00040184:hcf-1nc_sir-2.1nc_daf-2up
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.2
WBPaper00040603:tdp-1(lf)_up_vs_N2_FC_1.5
WBPaper00040858:eQTL_age_regulated_developing
WBPaper00040963:Q100_down
WBPaper00040963:Q200_down
WBPaper00040985:AIN-2_L4_intestine
WBPaper00041002:HF_3d_0.2mM_Up
WBPaper00041002:HF_3d_2.0mM_Up
WBPaper00041002:HF_11d_0.2mM_Up
WBPaper00041002:HQ_3d_0.2mM_Up
WBPaper00041002:HQ_3d_2.0mM_Up
WBPaper00041211:RPW-24_Up
WBPaper00041370:spg-7(RNAi)_upregulated
WBPaper00041606:CE_S.marcescens_regulated
WBPaper00041939:control_vs_EtBr-exposed_48h
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
WBPaper00041960:N2_fasting_upregulated_anytime
WBPaper00042274:tbx-2(bx59)_upregulated
WBPaper00045673:colistin_upregulated
WBPaper00047070:N2_starvation_upregulated
WBPaper00047070:xpa-1_UV_upregulated
WBPaper00051448:P.aeruginosa_Slow-Killing_upregulated
WBPaper00053236:daf-16(mgDF50)_regulated_Starved
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
WBPaper00057098:SiO2-nanoparticles_upregulated
InteractionWBInteraction000192173
WBInteraction000207116
WBInteraction000231113
WBInteraction000232366
WBInteraction000237406
WBInteraction000261883
WBInteraction000282202
WBInteraction000286370
WBInteraction000286736
WBInteraction000299859
WBInteraction000311152
WBInteraction000324450
WBInteraction000334747
WBInteraction000341794
WBInteraction000345540
WBInteraction000354709
WBInteraction000368642
WBInteraction000376061
WBInteraction000378466
WBInteraction000381137
WBInteraction000390464
WBInteraction000405363
WBInteraction000406027
WBInteraction000409906
WBInteraction000433673
WBInteraction000441908
WBInteraction000453045
WBInteraction000454706
WBInteraction000457169
WBInteraction000541065
WBInteraction000541066
Map_infoPositivePositive_cloneC50F4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionV2.04381
MethodGene