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WormBase Tree Display for Gene: WBGene00008169

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Name Class

WBGene00008169SMapS_parentSequenceC48B4
IdentityVersion1
NameSequence_nameC48B4.6
Molecular_nameC48B4.6
C48B4.6.1
CE00482
Other_nameCELE_C48B4.6Accession_evidenceNDBBX284603
Public_nameC48B4.6
DB_infoDatabaseAceViewgene3K646
WormQTLgeneWBGene00008169
WormFluxgeneWBGene00008169
NDBlocus_tagCELE_C48B4.6
NCBIgene183566
RefSeqproteinNM_066708.4
SwissProtUniProtAccP34360
TREEFAMTREEFAM_IDTF322867
UniProt_GCRPUniProtAccP34360
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (18)
RNASeq_FPKM (74)
Contained_in_operonCEOP3600
OrthologWBGene00139994Caenorhabditis brenneriFrom_analysisTreeFam
chrIII_pilon.g8648Caenorhabditis elegansFrom_analysisWormBase-Compara
ParalogWBGene00008172Caenorhabditis elegansFrom_analysisTreeFam
WBGene00008173Caenorhabditis elegansFrom_analysisTreeFam
WBGene00008170Caenorhabditis elegansFrom_analysisTreeFam
Structured_descriptionAutomated_descriptionEnriched in Psub1; germ line; germline precursor cell; head mesodermal cell; and intestine based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by nine chemicals including hydrogen sulfide; rotenone; and stavudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Family of unknown function (DUF5373) and Protein of unknown function DUF5373.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC48B4.6
Corresponding_transcriptC48B4.6.1
Associated_featureWBsf227314
Experimental_infoRNAi_resultWBRNAi00012095Inferred_automaticallyRNAi_primary
WBRNAi00029934Inferred_automaticallyRNAi_primary
WBRNAi00042716Inferred_automaticallyRNAi_primary
WBRNAi00061761Inferred_automaticallyRNAi_primary
WBRNAi00006935Inferred_automaticallyRNAi_primary
WBRNAi00042715Inferred_automaticallyRNAi_primary
WBRNAi00006746Inferred_automaticallyRNAi_primary
Expr_patternExpr1028920
Expr1033549
Expr1146707
Expr2001734
Expr2019962
Drives_constructWBCnstr00033184
Construct_productWBCnstr00033184
Microarray_results (16)
Expression_cluster (126)
Interaction (21)
Map_infoPositivePositive_cloneC48B4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionIII0.603231
MethodGene