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WormBase Tree Display for CDS: C48B4.6

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Name Class

C48B4.6EvidenceInferred_automaticallymake_isoforms.pl
SMapS_parentSequenceC48B4
StructureSource_exons1171
541673
721801
847992
DB_infoDatabaseSwissProtUniProtAccP34360
UniProtUniProtAccP34360
UniProt_GCRPUniProtAccP34360
AlphaFoldentryP34360
NCBI_proteinGI_numberGI:3875019
TREEFAMTREEFAM_IDTF322867
Protein_idCHROMOSOME_IIICAA823781
DB_remarkcontains similarity to Pfam domain PF17343 (Family of unknown function (DUF5373)); contains similarity to Interpro domain IPR035321 (Protein of unknown function DUF5373)
OriginFrom_laboratoryHX
SpeciesCaenorhabditis elegans
PropertiesCodingCDS
Prediction_statusConfirmed
VisibleGeneWBGene00008169
Corresponding_transcriptC48B4.6.1
Corresponding_proteinCE00482
Corresponding_PCR_productTH:330C9
TH:334C8
cenix:330-c9
cenix:334-c8
mv_C48B4.6
sjj_C48B4.6
smd_C48B4.6
Corresponding_oligo_set (14)
Matching_cDNA (18)
RNAi_resultWBRNAi00012095
WBRNAi00029934
WBRNAi00042716
WBRNAi00061761
WBRNAi00006935
WBRNAi00042715
WBRNAi00006746
Microarray_results (16)
RNASeq_FPKM (74)
Methodcurated