WormBase Tree Display for Gene: WBGene00008169
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WBGene00008169 | SMap | S_parent | Sequence | C48B4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | C48B4.6 | |||||||
Molecular_name | C48B4.6 | ||||||||
C48B4.6.1 | |||||||||
CE00482 | |||||||||
Other_name | CELE_C48B4.6 | Accession_evidence | NDB | BX284603 | |||||
Public_name | C48B4.6 | ||||||||
DB_info | Database | AceView | gene | 3K646 | |||||
WormQTL | gene | WBGene00008169 | |||||||
WormFlux | gene | WBGene00008169 | |||||||
NDB | locus_tag | CELE_C48B4.6 | |||||||
NCBI | gene | 183566 | |||||||
RefSeq | protein | NM_066708.4 | |||||||
SwissProt | UniProtAcc | P34360 | |||||||
TREEFAM | TREEFAM_ID | TF322867 | |||||||
UniProt_GCRP | UniProtAcc | P34360 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (18) | |||||||||
RNASeq_FPKM (74) | |||||||||
Contained_in_operon | CEOP3600 | ||||||||
Ortholog (2) | |||||||||
Paralog | WBGene00008172 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
WBGene00008173 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00008170 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Structured_description | Automated_description | Enriched in Psub1; germ line; germline precursor cell; head mesodermal cell; and intestine based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by nine chemicals including hydrogen sulfide; rotenone; and stavudine based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Family of unknown function (DUF5373) and Protein of unknown function DUF5373. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C48B4.6 | |||||||
Corresponding_transcript | C48B4.6.1 | ||||||||
Associated_feature | WBsf227314 | ||||||||
Experimental_info | RNAi_result | WBRNAi00012095 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00029934 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00042716 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00061761 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00006935 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00042715 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00006746 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1028920 | ||||||||
Expr1033549 | |||||||||
Expr1146707 | |||||||||
Expr2001734 | |||||||||
Expr2019962 | |||||||||
Drives_construct | WBCnstr00033184 | ||||||||
Construct_product | WBCnstr00033184 | ||||||||
Microarray_results (16) | |||||||||
Expression_cluster (126) | |||||||||
Interaction (21) | |||||||||
Map_info | Positive | Positive_clone | C48B4 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | III | 0.603231 | |||||||
Method | Gene |