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WormBase Tree Display for Gene: WBGene00007963

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Name Class

WBGene00007963SMapS_parentSequenceC36A4
IdentityVersion2
NameCGC_namecyp-25A1
Sequence_nameC36A4.1
Molecular_nameC36A4.1
C36A4.1.1
CE43488
Other_nameCELE_C36A4.1Accession_evidenceNDBBX284603
Public_namecyp-25A1
DB_infoDatabaseAceViewgene3E921
WormQTLgeneWBGene00007963
WormFluxgeneWBGene00007963
NDBlocus_tagCELE_C36A4.1
PanthergeneCAEEL|WormBase=WBGene00007963|UniProtKB=Q27477
familyPTHR24292
NCBIgene183247
RefSeqproteinNM_065374.5
TrEMBLUniProtAccQ27477
UniProt_GCRPUniProtAccQ27477
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
221 Sep 2004 09:38:16WBPerson1971Name_changeCGC_namecyp-25A1
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classcyp
Allele (42)
RNASeq_FPKM (74)
GO_annotation00079698
00079699
00079700
00079701
00115938
00115939
00115940
00115941
OrthologWBGene00039199Caenorhabditis briggsaeFrom_analysisOrthoMCL
WormBase-Compara
WBGene00039200Caenorhabditis briggsaeFrom_analysisOrthoMCL
WBGene00069264Caenorhabditis remaneiFrom_analysisTreeFam
WBGene00069265Caenorhabditis remaneiFrom_analysisTreeFam
WormBase-Compara
WBGene00148236Caenorhabditis brenneriFrom_analysisTreeFam
WormBase-Compara
WBGene00133879Caenorhabditis japonicaFrom_analysisTreeFam
WormBase-Compara
WBGene00139883Caenorhabditis brenneriFrom_analysisTreeFam
WBGene00061504Caenorhabditis remaneiFrom_analysisTreeFam
CBOVI.g4500Caenorhabditis bovisFrom_analysisWormBase-Compara
CSP21.g2876Caenorhabditis parvicaudaFrom_analysisWormBase-Compara
CSP26.g13780Caenorhabditis zanzibariFrom_analysisWormBase-Compara
CSP28.g1793Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP28.g1794Caenorhabditis panamensisFrom_analysisWormBase-Compara
CSP29.g11724Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g16837Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP29.g16838Caenorhabditis beceiFrom_analysisWormBase-Compara
CSP31.g22425Caenorhabditis uteleiaFrom_analysisWormBase-Compara
CSP32.g10507Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g10600Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP32.g10602Caenorhabditis sulstoniFrom_analysisWormBase-Compara
CSP38.g6325Caenorhabditis quiockensisFrom_analysisWormBase-Compara
CSP39.g15089Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g6982Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g834Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP39.g835Caenorhabditis waitukubuliFrom_analysisWormBase-Compara
CSP40.g22035Caenorhabditis tribulationisFrom_analysisWormBase-Compara
Cang_2012_03_13_01129.g15758Caenorhabditis angariaFrom_analysisWormBase-Compara
Cnig_chr_III.g8894Caenorhabditis nigoniFrom_analysisWormBase-Compara
Csp11.Scaffold97.g546Caenorhabditis tropicalisFrom_analysisWormBase-Compara
Csp5_scaffold_05404.g34921Caenorhabditis sinicaFrom_analysisWormBase-Compara
FL83_07913Caenorhabditis latensFrom_analysisWormBase-Compara
GCK72_009228Caenorhabditis remaneiFrom_analysisWormBase-Compara
Pan_g19443Panagrellus redivivusFrom_analysisWormBase-Compara
Pan_g3317Panagrellus redivivusFrom_analysisWormBase-Compara
Sp34_30319700Caenorhabditis inopinataFrom_analysisWormBase-Compara
chrIII_pilon.g7324Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00206965Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00218270Caenorhabditis japonicaFrom_analysisWormBase-Compara
WBGene00090685Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00093288Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00102798Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00115389Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00118970Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00118977Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00278988Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00279268Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280018Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00280019Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00281397Pristionchus pacificusFrom_analysisWormBase-Compara
WBGene00264381Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00264895Strongyloides rattiFrom_analysisWormBase-Compara
WBGene00289968Trichuris murisFrom_analysisWormBase-Compara
WBGene00297427Trichuris murisFrom_analysisWormBase-Compara
FB:FBgn0031126Drosophila melanogasterFrom_analysisOrthoFinder
OrthoInspector
Panther
SonicParanoid
FB:FBgn0031182Drosophila melanogasterFrom_analysisInparanoid
OrthoFinder
OrthoInspector
Panther
SonicParanoid
FB:FBgn0032693Drosophila melanogasterFrom_analysisOrthoFinder
Panther
SonicParanoid
FB:FBgn0033065Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
FB:FBgn0000473Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
FB:FBgn0033121Drosophila melanogasterFrom_analysisOrthoFinder
Panther
SonicParanoid
FB:FBgn0015038Drosophila melanogasterFrom_analysisOMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
FB:FBgn0015039Drosophila melanogasterFrom_analysisOMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
FB:FBgn0033302Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
FB:FBgn0033304Drosophila melanogasterFrom_analysisOMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
FB:FBgn0025454Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
FB:FBgn0033696Drosophila melanogasterFrom_analysisInparanoid
OrthoFinder
OrthoInspector
Panther
SonicParanoid
FB:FBgn0033978Drosophila melanogasterFrom_analysisOMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
FB:FBgn0033979Drosophila melanogasterFrom_analysisOMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
FB:FBgn0013771Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
FB:FBgn0033980Drosophila melanogasterFrom_analysisOMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
FB:FBgn0033981Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoFinder
Panther
SonicParanoid
FB:FBgn0013772Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
FB:FBgn0033982Drosophila melanogasterFrom_analysisInparanoid
OMA
Panther
SonicParanoid
FB:FBgn0038037Drosophila melanogasterFrom_analysisOMA
OrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
FB:FBgn0039006Drosophila melanogasterFrom_analysisOrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
FB:FBgn0039519Drosophila melanogasterFrom_analysisInparanoid
OMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
FB:FBgn0015714Drosophila melanogasterFrom_analysisOMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
FB:FBgn0013773Drosophila melanogasterFrom_analysisOrthoFinder
OrthoInspector
Panther
PhylomeDB
SonicParanoid
FB:FBgn0038034Drosophila melanogasterFrom_analysisOrthoFinder
Panther
SonicParanoid
FB:FBgn0031726Drosophila melanogasterFrom_analysisOMA
OrthoFinder
OrthoInspector
Panther
SonicParanoid
ParalogWBGene00007967Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00007964Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00014697Caenorhabditis elegansFrom_analysisTreeFam
Panther
WormBase-Compara
WBGene00018326Caenorhabditis elegansFrom_analysisTreeFam
WBGene00017108Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00019438Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00000375Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionConcise_descriptioncyp-25A1 encodes one of ~80 C. elegans cytochrome P450s: membrane-associated, heme-containing NADPH-dependent monooxygenases that catalyze the oxidative metabolism of a variety of exogenous compounds and endogenous substrates.Curator_confirmedWBPerson1843
Date_last_updated20 Nov 2008 00:00:00
Automated_descriptionPredicted to enable heme binding activity; iron ion binding activity; and oxidoreductase activity. Predicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC36A4.1
Corresponding_CDS_historyC36A4.1:wp134
C36A4.1:wp200
Corresponding_transcriptC36A4.1.1
Associated_featureWBsf645045
WBsf224655
Experimental_infoRNAi_result (11)
Expr_patternExpr1017572
Expr1146019
Expr2010696
Expr2028935
Drives_constructWBCnstr00033346
Construct_productWBCnstr00033346
Microarray_results (20)
Expression_cluster (308)
Interaction (65)
Map_infoMapIIIPosition-4.24934Error0.000113
PositivePositive_cloneC36A4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Pseudo_map_position
ReferenceWBPaper00038491
WBPaper00042257
WBPaper00049920
WBPaper00055090
WBPaper00061938
WBPaper00065331
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene