WormBase Tree Display for Gene: WBGene00007848
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WBGene00007848 | SMap | S_parent | Sequence | C31E10 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | cytb-5.1 | Person_evidence | WBPerson681 | |||
Sequence_name | C31E10.7 | ||||||
Molecular_name | C31E10.7 | ||||||
C31E10.7.1 | |||||||
CE37487 | |||||||
Other_name | cytochrome b5 | Paper_evidence | WBPaper00040883 | ||||
CELE_C31E10.7 | Accession_evidence | NDB | BX284606 | ||||
Public_name | cytb-5.1 | ||||||
DB_info | Database (11) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | cytb | ||||||
Allele (24) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00085658 | ||||||
00085659 | |||||||
00085660 | |||||||
00085661 | |||||||
00085662 | |||||||
00085663 | |||||||
00085664 | |||||||
00085665 | |||||||
Ortholog (48) | |||||||
Paralog | WBGene00010235 | Caenorhabditis elegans | From_analysis | Panther | |||
WormBase-Compara | |||||||
WBGene00014300 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00020931 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
Structured_description | Concise_description | cytb-5.1 encodes a protein orthologous to cytochrome b5; a CYTB-5.1 reporter fusion protein, when expressed in the distal tip cell, exhibits perinuclear localization, consistent with localization to the endoplasmic reticulum. | Paper_evidence | WBPaper00040883 | |||
Curator_confirmed | WBPerson1843 | ||||||
WBPerson1823 | |||||||
WBPerson567 | |||||||
Date_last_updated | 16 Mar 2012 00:00:00 | ||||||
Automated_description | Predicted to enable heme binding activity. Located in perinuclear region of cytoplasm. Used to study hematopoietic system disease. Human ortholog(s) of this gene implicated in methemoglobinemia; methemoglobinemia and ambiguous genitalia; and stomatitis. Is an ortholog of human CYB5A (cytochrome b5 type A) and CYB5B (cytochrome b5 type B). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Disease_info | Experimental_model | DOID:74 | Homo sapiens | Paper_evidence | WBPaper00053474 | ||
Curator_confirmed | WBPerson324 | ||||||
Date_last_updated | 09 May 2023 00:00:00 | ||||||
Potential_model | DOID:0112316 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2570) | |||
DOID:10783 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2570) | ||||
DOID:9637 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2570) | ||||
Models_disease_in_annotation | WBDOannot00000049 | ||||||
Molecular_info | Corresponding_CDS | C31E10.7 | |||||
Corresponding_CDS_history | C31E10.7:wp132 | ||||||
Corresponding_transcript | C31E10.7.1 | ||||||
Other_sequence (80) | |||||||
Associated_feature | WBsf648705 | ||||||
WBsf655229 | |||||||
WBsf663528 | |||||||
WBsf1007797 | |||||||
WBsf1024340 | |||||||
WBsf236630 | |||||||
WBsf236631 | |||||||
WBsf236632 | |||||||
Experimental_info | RNAi_result | WBRNAi00033345 | Inferred_automatically | RNAi_primary | |||
WBRNAi00024689 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00071638 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00111894 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00008470 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00105933 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00071637 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00041615 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00088736 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00088629 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr13447 | ||||||
Expr1024592 | |||||||
Expr1033402 | |||||||
Expr1145640 | |||||||
Expr2010751 | |||||||
Expr2028988 | |||||||
Drives_construct | WBCnstr00033436 | ||||||
Construct_product | WBCnstr00000237 | ||||||
WBCnstr00033436 | |||||||
WBCnstr00040361 | |||||||
Microarray_results (20) | |||||||
Expression_cluster (180) | |||||||
Interaction (55) | |||||||
Map_info | Map | X | Position | 15.9609 | |||
Positive | Positive_clone | C31E10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00034497 | ||||||
WBPaper00034498 | |||||||
WBPaper00038491 | |||||||
WBPaper00040883 | |||||||
WBPaper00053474 | |||||||
WBPaper00055090 | |||||||
WBPaper00060223 | |||||||
WBPaper00061328 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |