WormBase Tree Display for Gene: WBGene00020931
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| WBGene00020931 | SMap | S_parent | Sequence | W02D3 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | cytb-5.2 | Person_evidence | WBPerson681 | |||||
| Sequence_name | W02D3.1 | ||||||||
| Molecular_name | W02D3.1 | ||||||||
| W02D3.1.1 | |||||||||
| CE14418 | |||||||||
| Other_name | CELE_W02D3.1 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | cytb-5.2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 28 May 2004 13:31:03 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of stlace from WS125 | ||
| 2 | 30 Sep 2011 16:40:15 | WBPerson2970 | Name_change | CGC_name | cytb-5.2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | cytb | ||||||||
| Allele | WBVar01499786 | ||||||||
| WBVar01499054 | |||||||||
| WBVar02127691 | |||||||||
| WBVar00645613 | |||||||||
| WBVar00645614 | |||||||||
| WBVar02156645 | |||||||||
| WBVar01909705 | |||||||||
| WBVar00336831 | |||||||||
| WBVar01498959 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00025822 | ||||||||
| 00025823 | |||||||||
| 00025824 | |||||||||
| 00025825 | |||||||||
| 00025826 | |||||||||
| 00025827 | |||||||||
| Contained_in_operon | CEOP1344 | ||||||||
| Ortholog (39) | |||||||||
| Paralog | WBGene00007848 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00010235 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00014300 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Predicted to enable heme binding activity. Predicted to be located in intracellular membrane-bounded organelle and membrane. Human ortholog(s) of this gene implicated in methemoglobinemia; methemoglobinemia and ambiguous genitalia; and stomatitis. Is an ortholog of human CYB5A (cytochrome b5 type A). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0112316 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2570) | ||||
| DOID:10783 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2570) | ||||||
| DOID:9637 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:2570) | ||||||
| Molecular_info | Corresponding_CDS | W02D3.1 | |||||||
| Corresponding_transcript | W02D3.1.1 | ||||||||
| Other_sequence (70) | |||||||||
| Associated_feature | WBsf217882 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00073304 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00070193 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00036183 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00073306 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00073305 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054583 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr13448 | ||||||||
| Expr1024509 | |||||||||
| Expr1039118 | |||||||||
| Expr1158127 | |||||||||
| Expr2010752 | |||||||||
| Expr2028989 | |||||||||
| Drives_construct | WBCnstr00024777 | ||||||||
| Construct_product | WBCnstr00024777 | ||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (118) | |||||||||
| Interaction (14) | |||||||||
| Map_info | Map | I | Position | 1.30347 | Error | 0.000365 | |||
| Positive | Positive_clone | W02D3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00053474 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
