WormBase Tree Display for Gene: WBGene00007658
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| WBGene00007658 | SMap | S_parent | Sequence | C17H1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pals-4 | Person_evidence | WBPerson260 | |||||
| Sequence_name | C17H1.5 | ||||||||
| Molecular_name | C17H1.5 | ||||||||
| WP:CE15627 | |||||||||
| CE15627 | |||||||||
| C17H1.5.1 | |||||||||
| Other_name | CELE_C17H1.5 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | pals-4 | ||||||||
| DB_info | Database | AceView | gene | 1N707 | |||||
| WormQTL | gene | WBGene00007658 | |||||||
| WormFlux | gene | WBGene00007658 | |||||||
| NDB | locus_tag | CELE_C17H1.5 | |||||||
| NCBI | gene | 182747 | |||||||
| RefSeq | mRNA | NM_060896.1 | |||||||
| protein | NP_493297.1 | ||||||||
| NM_060896.2 | |||||||||
| TREEFAM | TREEFAM_ID | TF322878 | |||||||
| UniProt | UniProtAcc | O45256 | |||||||
| TrEMBL | UniProtAcc | O45256 | |||||||
| UniProt_GCRP | UniProtAcc | O45256 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 26 Oct 2016 09:42:35 | WBPerson2970 | Name_change | CGC_name | pals-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pals | ||||||||
| Allele | WBVar02120442 | ||||||||
| WBVar01499739 | |||||||||
| WBVar02075490 | |||||||||
| WBVar02124149 | |||||||||
| WBVar02124150 | |||||||||
| WBVar02074586 | |||||||||
| WBVar01499230 | |||||||||
| WBVar00349632 | |||||||||
| WBVar00349633 | |||||||||
| WBVar00349634 | |||||||||
| WBVar00349635 | |||||||||
| WBVar00349636 | |||||||||
| WBVar00349637 | |||||||||
| WBVar02151527 | |||||||||
| WBVar02069222 | |||||||||
| WBVar00683344 | |||||||||
| WBVar00683345 | |||||||||
| WBVar00683346 | |||||||||
| WBVar01499999 | |||||||||
| WBVar00683347 | |||||||||
| WBVar00683348 | |||||||||
| WBVar00683349 | |||||||||
| WBVar00683350 | |||||||||
| WBVar00683351 | |||||||||
| WBVar00683352 | |||||||||
| WBVar00683353 | |||||||||
| WBVar00683354 | |||||||||
| WBVar00683355 | |||||||||
| WBVar00683356 | |||||||||
| WBVar00683357 | |||||||||
| WBVar00683358 | |||||||||
| WBVar00683359 | |||||||||
| WBVar00683360 | |||||||||
| WBVar00683361 | |||||||||
| WBVar00683362 | |||||||||
| WBVar00683363 | |||||||||
| WBVar02120914 | |||||||||
| WBVar00683364 | |||||||||
| WBVar00683365 | |||||||||
| WBVar00683366 | |||||||||
| WBVar02123874 | |||||||||
| WBVar02128856 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | Sp34_50055100 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | |||||
| chrI_pilon.g2652 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00007656 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| WBGene00007662 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00009061 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00013294 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00016281 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00044237 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00044711 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in dopaminergic neurons based on tiling array studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by nine chemicals including D-glucose; Psoralens; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C17H1.5 | |||||||
| Corresponding_transcript | C17H1.5.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00029027 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00040848 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00002982 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1144895 | ||||||||
| Drives_construct | WBCnstr00033574 | ||||||||
| Construct_product | WBCnstr00033574 | ||||||||
| Microarray_results (13) | |||||||||
| Expression_cluster (161) | |||||||||
| Interaction (21) | |||||||||
| Map_info | Map | I | Position | 17.2202 | |||||
| Positive | Positive_clone | C17H1 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00057312 | ||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
