WormBase Tree Display for Gene: WBGene00007577

WBGene00007577 SMap: S_parent: Sequence: C14B1
  Identity: Version: 2
    Name: CGC_name: nrde-1 Person_evidence: WBPerson5515
            WBPerson315
      Sequence_name: C14B1.6
      Molecular_name: C14B1.6a
        C14B1.6a.1
        CE31415
        C14B1.6b
        CE52454
        C14B1.6b.1
      Other_name: CELE_C14B1.6 Accession_evidence: NDB BX284603
      Public_name: nrde-1
    DB_info: Database: AceView gene 3E807
        WormQTL gene WBGene00007577
        WormFlux gene WBGene00007577
        NDB locus_tag CELE_C14B1.6
        NCBI gene 175477
        RefSeq protein NM_001361894.4
            NM_065351.8
        TrEMBL UniProtAcc Q17968
            A0A2K5ATT7
        UniProt_GCRP UniProtAcc Q17968
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 17 May 2011 14:01:04 WBPerson2970 Name_change: CGC_name: nrde-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nrde
    Allele (119)
    Strain: WBStrain00040757
    RNASeq_FPKM (74)
    GO_annotation: 00059813
      00059814
    Contained_in_operon: CEOP3136
    Ortholog (24)
    Structured_description: Concise_description: nrde-1 encodes a novel protein conserved amongst nematodes; NRDE-1 activity is required, along with that of NRDE-2, NRDE-3, and NRDE-4, for regulation of gene expression via a nuclear RNAi pathway that inhibits RNA polymerase II elongation and deposits histone H3K9 methylation on genomic regions targeted by RNAi; an NRDE-1:GFP fusion protein localizes to the nucleus. Paper_evidence: WBPaper00040168
          Curator_confirmed: WBPerson1843
          Date_last_updated: 09 Sep 2011 00:00:00
      Automated_description: Involved in regulatory ncRNA-mediated post-transcriptional gene silencing. Located in nucleus. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C14B1.6a
      C14B1.6b
    Corresponding_CDS_history: C14B1.6:wp82
    Corresponding_transcript: C14B1.6a.1
      C14B1.6b.1
    Other_sequence: CRC07998_1
      CR04204
    Associated_feature: WBsf658767
      WBsf658768
      WBsf991880
      WBsf991881
      WBsf224647
  Experimental_info: RNAi_result: WBRNAi00010727 Inferred_automatically: RNAi_primary
      WBRNAi00067969 Inferred_automatically: RNAi_primary
      WBRNAi00067214 Inferred_automatically: RNAi_primary
      WBRNAi00040497 Inferred_automatically: RNAi_primary
      WBRNAi00040494 Inferred_automatically: RNAi_primary
      WBRNAi00006299 Inferred_automatically: RNAi_primary
      WBRNAi00010725 Inferred_automatically: RNAi_primary
      WBRNAi00006346 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr9671
      Expr1024514
      Expr1033260
      Expr1144562
      Expr2014438
      Expr2032679
    Drives_construct: WBCnstr00033637
    Construct_product: WBCnstr00014214
      WBCnstr00033637
    Microarray_results (20)
    Expression_cluster (100)
    Interaction: WBInteraction000363076
      WBInteraction000441362
      WBInteraction000570063
  Map_info: Map: III Position: -4.35611 Error: 0.037595
    Positive: Positive_clone: C14B1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (18)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene