WormBase Tree Display for Gene: WBGene00007577

WBGene00007577 SMap: S_parent: Sequence: C14B1
  Identity: Version: 2
    Name: CGC_name: nrde-1 Person_evidence: WBPerson5515
            WBPerson315
      Sequence_name: C14B1.6
      Molecular_name: C14B1.6a
        C14B1.6a.1
        CE31415
        C14B1.6b
        CE52454
        C14B1.6b.1
      Other_name: CELE_C14B1.6 Accession_evidence: NDB BX284603
      Public_name: nrde-1
    DB_info: Database: AceView gene 3E807
        WormQTL gene WBGene00007577
        WormFlux gene WBGene00007577
        NDB locus_tag CELE_C14B1.6
        NCBI gene 175477
        RefSeq protein NM_001361894.4
            NM_065351.8
        TrEMBL UniProtAcc Q17968
            A0A2K5ATT7
        UniProt_GCRP UniProtAcc Q17968
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 17 May 2011 14:01:04 WBPerson2970 Name_change: CGC_name: nrde-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: nrde
    Allele: WBVar00601046 Inferred_automatically: From strain object: YY160
      WBVar01994949
      WBVar01994950
      WBVar01994951
      WBVar02010360
      WBVar02010363
      WBVar02067454
      WBVar02114375
      WBVar01643976
      WBVar01445062
      WBVar01643977
      WBVar01445063
      WBVar01445064
      WBVar01445065
      WBVar01445066
      WBVar01445069
      WBVar01445070
      WBVar01498832
      WBVar01962624
      WBVar01499768
      WBVar01499769
      WBVar00057681
      WBVar00057686
      WBVar01541694
      WBVar02100248
      WBVar02100249
      WBVar01952115
      WBVar00298397
      WBVar00298398
      WBVar00308922
      WBVar00275842
      WBVar00098897
      WBVar00308923
      WBVar00098898
      WBVar01709878
      WBVar01709879
      WBVar01496866
      WBVar01938906
      WBVar01938907
      WBVar01938908
      WBVar01938909
      WBVar01479576
      WBVar01479577
      WBVar01479578
      WBVar01628328
      WBVar02131784
      WBVar01479579
      WBVar01628329
      WBVar01628330
      WBVar00817463
      WBVar01990021
      WBVar01628331
      WBVar01990022
      WBVar00817464
      WBVar01628332
      WBVar01628333
      WBVar01990023
      WBVar00817465
      WBVar01628334
      WBVar01566257
      WBVar00817466
      WBVar01990024
      WBVar01566258
      WBVar00817467
      WBVar00817468
      WBVar00817469
      WBVar00817470
      WBVar00817471
      WBVar00817472
      WBVar00817473
      WBVar00817474
      WBVar00817475
      WBVar00817476
      WBVar00817477
      WBVar01262299
      WBVar00817478
      WBVar01262300
      WBVar00817479
      WBVar01262301
      WBVar00817480
      WBVar02095894
      WBVar01262302
      WBVar00817481
      WBVar00817482
      WBVar01262304
      WBVar00817483
      WBVar01262305
      WBVar01606983
      WBVar00817484
      WBVar00817485
      WBVar00817486
      WBVar00817487
      WBVar00817488
      WBVar01785345
      WBVar00046596
      WBVar01408404
      WBVar01408405
      WBVar02106952
      WBVar00046601
      WBVar01408406
      WBVar01408407
      WBVar01408408
      WBVar00394597
      WBVar00394598
      WBVar00394599
      WBVar00394600
      WBVar00394601
      WBVar00394602
      WBVar00394603
      WBVar00394604
      WBVar00394605
      WBVar00394606
      WBVar00236319
      WBVar01396641
      WBVar00236320
      WBVar01396643
      WBVar00297226
      WBVar02057281
      WBVar01994948
    Strain: WBStrain00040757
    RNASeq_FPKM (74)
    GO_annotation: 00059813
      00059814
    Contained_in_operon: CEOP3136
    Ortholog (24)
    Structured_description: Concise_description: nrde-1 encodes a novel protein conserved amongst nematodes; NRDE-1 activity is required, along with that of NRDE-2, NRDE-3, and NRDE-4, for regulation of gene expression via a nuclear RNAi pathway that inhibits RNA polymerase II elongation and deposits histone H3K9 methylation on genomic regions targeted by RNAi; an NRDE-1:GFP fusion protein localizes to the nucleus. Paper_evidence: WBPaper00040168
          Curator_confirmed: WBPerson1843
          Date_last_updated: 09 Sep 2011 00:00:00
      Automated_description: Involved in regulatory ncRNA-mediated post-transcriptional gene silencing. Located in nucleus. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C14B1.6a
      C14B1.6b
    Corresponding_CDS_history: C14B1.6:wp82
    Corresponding_transcript: C14B1.6a.1
      C14B1.6b.1
    Other_sequence: CRC07998_1
      CR04204
    Associated_feature: WBsf658767
      WBsf658768
      WBsf991880
      WBsf991881
      WBsf224647
  Experimental_info: RNAi_result: WBRNAi00010727 Inferred_automatically: RNAi_primary
      WBRNAi00067969 Inferred_automatically: RNAi_primary
      WBRNAi00067214 Inferred_automatically: RNAi_primary
      WBRNAi00040497 Inferred_automatically: RNAi_primary
      WBRNAi00040494 Inferred_automatically: RNAi_primary
      WBRNAi00006299 Inferred_automatically: RNAi_primary
      WBRNAi00010725 Inferred_automatically: RNAi_primary
      WBRNAi00006346 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr9671
      Expr1024514
      Expr1033260
      Expr1144562
      Expr2014438
      Expr2032679
    Drives_construct: WBCnstr00033637
    Construct_product: WBCnstr00014214
      WBCnstr00033637
    Microarray_results (20)
    Expression_cluster (100)
    Interaction: WBInteraction000363076
      WBInteraction000441362
      WBInteraction000570063
  Map_info: Map: III Position: -4.35611 Error: 0.037595
    Positive: Positive_clone: C14B1 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (18)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene