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WormBase Tree Display for Gene: WBGene00007545

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Name Class

WBGene00007545SMapS_parentSequenceC13B4
IdentityVersion1
NameSequence_nameC13B4.1
Molecular_name (15)
Other_nameCELE_C13B4.1Accession_evidenceNDBBX284602
Public_nameC13B4.1
DB_infoDatabaseAceViewgene2O756
WormQTLgeneWBGene00007545
WormFluxgeneWBGene00007545
NDBlocus_tagCELE_C13B4.1
PanthergeneCAEEL|WormBase=WBGene00007545|UniProtKB=O45247
familyPTHR45828
NCBIgene175104
RefSeqproteinNM_064604.6
NM_001383994.2
NM_001306652.3
NM_001373819.2
NM_001373820.2
TREEFAMTREEFAM_IDTF316169
TrEMBLUniProtAccA5Z2V3
A0A486WTC7
O45247
A0A486WXC8
U4PRV8
UniProt_GCRPUniProtAccA0A486WXC8
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:48WBPerson1971EventImportedInitial conversion from CDS class of WS125
StatusLive
Gene_infoBiotypeSO:0001217
Allele (244)
RNASeq_FPKM (74)
GO_annotation00003477
Ortholog (27)
ParalogWBGene00007339Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00009081Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00013292Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00016627Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00019746Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00044589Caenorhabditis elegansFrom_analysisWormBase-Compara
WBGene00077490Caenorhabditis elegansFrom_analysisWormBase-Compara
Structured_descriptionAutomated_descriptionPredicted to be located in membrane.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSC13B4.1a
C13B4.1b
C13B4.1c
C13B4.1d
C13B4.1e
Corresponding_CDS_historyC13B4.1:wp109
Corresponding_transcriptC13B4.1a.1
C13B4.1b.1
C13B4.1c.1
C13B4.1d.1
C13B4.1e.1
Other_sequence (16)
Associated_featureWBsf666379
WBsf717836
WBsf990725
WBsf990726
WBsf1013850
WBsf1013851
WBsf224278
Experimental_infoRNAi_resultWBRNAi00028834Inferred_automaticallyRNAi_primary
WBRNAi00010669Inferred_automaticallyRNAi_primary
WBRNAi00040413Inferred_automaticallyRNAi_primary
Expr_patternExpr1023901
Expr1033244
Expr1144482
Expr2000739
Expr2018958
Drives_constructWBCnstr00033659
Construct_productWBCnstr00033659
Microarray_results (23)
Expression_clusterWBPaper00030922:glycosylated_protein
WBPaper00031040:TGF-beta_adult_downregulated
WBPaper00032425:up_in_lin-35
WBPaper00035211:age-1_vs_age-1_downregulated
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00042215:wdr-23(tm1817)_upregulated
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:oscillating_dev_expression
WBPaper00044786:emr-1(gk119)_downregulated
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_downregulated
WBPaper00045420:fertilization_downregulated_transcript
WBPaper00045521:Gender_Neutral
WBPaper00045571:germline-ablation_downregulated
WBPaper00048988:neuron_expressed
WBPaper00050488:20C_vs_25C_regulated_N2_adult
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(gk437)_regulated_dauer_20C
WBPaper00050488:N2_vs_mir-34(OverExpression)_regulated_dauer_20C
WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050859:downregulated_P-granule(-)GFP(-)_vs_control_day2-adult
WBPaper00050859:downregulated_pgl-1(ct131)_vs_control_day1-adult
WBPaper00050990:hypodermis_expressed
WBPaper00050990:NMDA-neuron_expressed
WBPaper00051039:germline_enriched
WBPaper00053184:sma-2(rax5)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053289:DREAM-target
WBPaper00053302:alovudine_24h_regulated
WBPaper00053302:stavudine_24h_regulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053321:PGCs_enriched_NuGen
WBPaper00053388:dauer_regulated_Cluster4
WBPaper00053810:nuo-6(qm200)_downregulated
WBPaper00055334:DLC-1_interacting
WBPaper00055354:Metformin_downregulated
WBPaper00055354:Rapamycin-Allantoin_upregulated
WBPaper00055354:Rapamycin_upregulated
WBPaper00055648:germline_expressed
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056275:P.aeruginosa_upregulated
WBPaper00056275:P.aeruginosa_upregulated_pmk-1(km25)_dependent
WBPaper00056284:ints-5(RNAi)_downregulated
WBPaper00056290:hsp-6(mg585)_downregulated
WBPaper00056326:zip-3(gk3164)_upregulated_P.aeruginosa-infected
WBPaper00056443:sek-1(km4)_downregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056471:S.aureus-4h_upregulated_N2
WBPaper00056826:hmc_biased
WBPaper00057006:DietaryRestriction_downregulated
WBPaper00057288:iff-1(RNAi)_downregulated_transcript
WBPaper00058598:sin-3(tm1276)_upregulated
WBPaper00058691:sin-3(tm1276)_upregulated
WBPaper00058725:sftb-1(cer6)_downregulated
WBPaper00059356:set-6(ok2195)_baz-2(tm0235)_regulated
WBPaper00060100:SiNP_upregulated_mRNA
WBPaper00060358:B.thuringiensis_pathogen_regulated_elt-2(RNAi)
WBPaper00060661:sensory-neuron_depleted
WBPaper00060703:nas-38(ok3407)_upregulated
WBPaper00060811:L1_vs_adult_downregulated_neural
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00061203:sin-3(tm1276)_downregulated
WBPaper00061340:AVK
WBPaper00061340:F_U
WBPaper00061340:Rectal_cell
WBPaper00061479:HDA-1_interacting_protein
WBPaper00061527:pbs-3_18439-rpn-5
WBPaper00061530:nhr-49(e2144)_upregulated
WBPaper00062325:muscle_depleted_coding-RNA
WBPaper00062669:extracellular-vesicle_protein
WBPaper00064005:starvation_downregulated_N2_mRNA
WBPaper00064071:NHR-49_interacting
WBPaper00064088:Day-1-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_daf-16(mu86);glp-1(e2141)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064088:Day-3-adult_vs_L4_upregulated_glp-1(e2141)
WBPaper00064107:lin-35(n745)_upregulated
WBPaper00064130:Beta-Amyloid_upregulated_protein
WBPaper00064716:paraquat_upregulated
WBPaper00065149:lin-52(n771)_upregulated
WBPaper00065373:Cisplatin_upregulated_WT
WBPaper00065373:sek-1(km4)_downregulated_cisplatin
WBPaper00065841:30_5
WBPaper00065841:58_0
WBPaper00065841:71_0
WBPaper00065841:78_0
WBPaper00066062:xrep-4(lax137)_upregulated
cgc4489_group_6
WBPaper00025032:cluster_8
WBPaper00025141:N2_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00031003:24hr_muscle_depleted
WBPaper00031003:total_muscle_depleted
WBPaper00031252:AIN-2_IP_enriched
WBPaper00032948:FedUp
WBPaper00035084:embryo_enriched_AIN-2_IP
WBPaper00035905:FBF-1_Associated
WBPaper00036286:Pattern_F
WBPaper00037611:GLD-2-associated
WBPaper00037611:RNP-8-associated
WBPaper00038427:lin-54_embryo_changed
WBPaper00040821:Au-NP_regulated
WBPaper00041002:HF_3d_0.2mM_Down
WBPaper00041002:HF_3d_2.0mM_Down
WBPaper00041002:HF_11d_2.0mM_Up
WBPaper00041606:CE_B.thuringiensis-DB27_regulated
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00047070:N2_UV_upregulated
WBPaper00048637:lin-35(n745)_starvation_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
WBPaper00053827:pyoverdine_upregulated
WBPaper00055435:AuNPs_downregulated
[cgc5767]:cluster_6
[cgc5767]:expression_class_M
[cgc5767]:expression_class_MD
[cgc5767]:expression_class_MD_pd(23_min)
[cgc5767]:expression_class_SM
[cgc5767]:expression_class_SMD
[cgc6390]:Cluster_F
InteractionWBInteraction000382661
WBInteraction000559071
WBInteraction000575325
Map_infoPositivePositive_cloneC13B4Inferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII23.017
Reference (2)
MethodGene