WormBase Tree Display for Gene: WBGene00007536
expand all nodes | collapse all nodes | view schema
WBGene00007536 | SMap | S_parent | Sequence | C12D8 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | daf-36 | Paper_evidence | WBPaper00027186 | |||
Person_evidence | WBPerson521 | ||||||
Sequence_name | C12D8.5 | ||||||
Molecular_name | C12D8.5 | ||||||
C12D8.5.1 | |||||||
CE34156 | |||||||
Other_name | CELE_C12D8.5 | Accession_evidence | NDB | BX284605 | |||
Public_name | daf-36 | ||||||
DB_info | Database (12) | ||||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | daf | ||||||
Allele (38) | |||||||
Strain | WBStrain00000022 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (15) | |||||||
Ortholog (26) | |||||||
Structured_description | Concise_description | daf-36 encodes a protein homologous to the catalytic subunit of Rieske-like oxygenases; DAF-36 functions in a hormone biosynthetic pathway producing a ligand for the DAF-12 nuclear receptor that regulates the developmental decision between reproductive growth and dauer formation; a daf-36::gfp reporter fusion is expressed in the intestine, the head mesodermal cell, two unidentified head neurons (not XXXR/L) and, in dauers, the lateral seam cells; DAF-36 localizes to the cytoplasm in the intestine and to a cytosolic meshwork in dauer seam cells. | Paper_evidence | WBPaper00027186 | |||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 29 Nov 2007 00:00:00 | ||||||
Automated_description | Predicted to enable oxidoreductase activity. Predicted to be involved in cholesterol metabolic process. Located in cytoplasm. Expressed in head mesodermal cell; intestine; neurons; and seam cell. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C12D8.5 | |||||
Corresponding_CDS_history | C12D8.5:wp102 | ||||||
Corresponding_transcript | C12D8.5.1 | ||||||
Other_sequence (13) | |||||||
Associated_feature | WBsf234352 | ||||||
Experimental_info | RNAi_result | WBRNAi00028827 | Inferred_automatically | RNAi_primary | |||
WBRNAi00040395 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr3866 | ||||||
Expr1014872 | |||||||
Expr1144465 | |||||||
Expr2010775 | |||||||
Expr2029012 | |||||||
Drives_construct | WBCnstr00033667 | ||||||
Construct_product | WBCnstr00008915 | ||||||
WBCnstr00008916 | |||||||
WBCnstr00008917 | |||||||
WBCnstr00015773 | |||||||
WBCnstr00033667 | |||||||
Microarray_results (18) | |||||||
Expression_cluster (171) | |||||||
Interaction (61) | |||||||
Map_info | Map | V | Position | 2.37946 | Error | 0.001577 | |
Positive | Positive_clone | C12D8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference (29) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |