WormBase Tree Display for Gene: WBGene00007536
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| WBGene00007536 | SMap | S_parent | Sequence | C12D8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | daf-36 | Paper_evidence | WBPaper00027186 | |||||
| Person_evidence | WBPerson521 | ||||||||
| Sequence_name | C12D8.5 | ||||||||
| Molecular_name | C12D8.5 | ||||||||
| C12D8.5.1 | |||||||||
| CE34156 | |||||||||
| Other_name | CELE_C12D8.5 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | daf-36 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 08 May 2006 11:53:28 | WBPerson2970 | Name_change | CGC_name | daf-36 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | daf | ||||||||
| Allele (38) | |||||||||
| Strain | WBStrain00000022 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Ortholog (26) | |||||||||
| Structured_description | Concise_description | daf-36 encodes a protein homologous to the catalytic subunit of Rieske-like oxygenases; DAF-36 functions in a hormone biosynthetic pathway producing a ligand for the DAF-12 nuclear receptor that regulates the developmental decision between reproductive growth and dauer formation; a daf-36::gfp reporter fusion is expressed in the intestine, the head mesodermal cell, two unidentified head neurons (not XXXR/L) and, in dauers, the lateral seam cells; DAF-36 localizes to the cytoplasm in the intestine and to a cytosolic meshwork in dauer seam cells. | Paper_evidence | WBPaper00027186 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 29 Nov 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable oxidoreductase activity. Predicted to be involved in cholesterol metabolic process. Located in cytoplasm. Expressed in head mesodermal cell; intestine; neurons; and seam cell. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C12D8.5 | |||||||
| Corresponding_CDS_history | C12D8.5:wp102 | ||||||||
| Corresponding_transcript | C12D8.5.1 | ||||||||
| Other_sequence (13) | |||||||||
| Associated_feature | WBsf234352 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00028827 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00040395 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr3866 | ||||||||
| Expr1014872 | |||||||||
| Expr1144465 | |||||||||
| Expr2010775 | |||||||||
| Expr2029012 | |||||||||
| Drives_construct | WBCnstr00033667 | ||||||||
| Construct_product | WBCnstr00008915 | ||||||||
| WBCnstr00008916 | |||||||||
| WBCnstr00008917 | |||||||||
| WBCnstr00015773 | |||||||||
| WBCnstr00033667 | |||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (171) | |||||||||
| Interaction (61) | |||||||||
| Map_info | Map | V | Position | 2.37946 | Error | 0.001577 | |||
| Positive | Positive_clone | C12D8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027186 | ||||||||
| WBPaper00029151 | |||||||||
| WBPaper00029184 | |||||||||
| WBPaper00030573 | |||||||||
| WBPaper00031480 | |||||||||
| WBPaper00031897 | |||||||||
| WBPaper00032624 | |||||||||
| WBPaper00033400 | |||||||||
| WBPaper00034311 | |||||||||
| WBPaper00034639 | |||||||||
| WBPaper00036004 | |||||||||
| WBPaper00036472 | |||||||||
| WBPaper00036582 | |||||||||
| WBPaper00037469 | |||||||||
| WBPaper00037474 | |||||||||
| WBPaper00038761 | |||||||||
| WBPaper00038933 | |||||||||
| WBPaper00038982 | |||||||||
| WBPaper00039870 | |||||||||
| WBPaper00042471 | |||||||||
| WBPaper00042964 | |||||||||
| WBPaper00044716 | |||||||||
| WBPaper00048971 | |||||||||
| WBPaper00056444 | |||||||||
| WBPaper00060837 | |||||||||
| WBPaper00062617 | |||||||||
| WBPaper00062779 | |||||||||
| WBPaper00064552 | |||||||||
| WBPaper00065580 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
