WormBase Tree Display for Gene: WBGene00007132
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WBGene00007132 | SMap | S_parent | Sequence | B0284 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | pals-27 | Person_evidence | WBPerson260 | |||
Sequence_name | B0284.2 | ||||||
Molecular_name | B0284.2 | ||||||
WP:CE00651 | |||||||
CE00651 | |||||||
B0284.2.1 | |||||||
Other_name | CELE_B0284.2 | Accession_evidence | NDB | BX284603 | |||
Public_name | pals-27 | ||||||
DB_info | Database | AceView | gene | 3F473 | |||
WormQTL | gene | WBGene00007132 | |||||
WormFlux | gene | WBGene00007132 | |||||
NDB | locus_tag | CELE_B0284.2 | |||||
NCBI | gene | 175567 | |||||
RefSeq | mRNA | NM_065483.5 | |||||
protein | NP_497884.1 | ||||||
NM_065483.8 | |||||||
TREEFAM | TREEFAM_ID | TF322628 | |||||
UniProt | UniProtAcc | Q17469 | |||||
TrEMBL | UniProtAcc | Q17469 | |||||
UniProt_GCRP | UniProtAcc | Q17469 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | pals | ||||||
Allele (30) | |||||||
RNASeq_FPKM (74) | |||||||
Ortholog | WBGene00028845 | Caenorhabditis briggsae | From_analysis | WormBase-Compara | |||
CSP26.g3004 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||
CSP26.g3005 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||
CSP40.g1855 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||
Cnig_chr_V.g18005 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||
Cnig_chr_V.g18455 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||
Csp5_scaffold_00680.g14347 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||
GCK72_019033 | Caenorhabditis remanei | From_analysis | WormBase-Compara | ||||
Sp34_30075900 | Caenorhabditis inopinata | From_analysis | WormBase-Compara | ||||
chrIII_pilon.g7436 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Paralog | WBGene00007131 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Inparanoid_8 | |||||||
WormBase-Compara | |||||||
WBGene00007134 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WormBase-Compara | |||||||
WBGene00007657 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00007659 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00007660 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00012505 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Automated_description | Enriched in several structures, including ABplapaaap; excretory cell; head mesodermal cell; male distal tip cell; and somatic gonad precursor based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including Sodium Chloride; Psoralens; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | B0284.2 | |||||
Corresponding_transcript | B0284.2.1 | ||||||
Associated_feature | WBsf992106 | ||||||
WBsf992107 | |||||||
WBsf224725 | |||||||
Experimental_info | RNAi_result | WBRNAi00002068 | Inferred_automatically | RNAi_primary | |||
WBRNAi00005126 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00038865 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00115944 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00009662 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00070091 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1143056 | ||||||
Expr2014700 | |||||||
Expr2032935 | |||||||
Microarray_results (14) | |||||||
Expression_cluster (241) | |||||||
Interaction | WBInteraction000288925 | ||||||
WBInteraction000342580 | |||||||
Map_info | Map | III | Position | -3.1784 | |||
Positive | Positive_clone | B0284 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00061319 | ||||||
WBPaper00062345 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |