WormBase Tree Display for Gene: WBGene00007089

WBGene00007089 SMap: S_parent: Sequence: B0001
  Identity: Version: 1
    Name: Sequence_name: B0001.4
      Molecular_name: B0001.4a
        B0001.4a.1
        CE37307
        B0001.4c
        CE52878
        B0001.4b
        B0001.4c.1
      Other_name: CELE_B0001.4 Accession_evidence: NDB BX284604
      Public_name: B0001.4
    DB_info: Database (13)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:47 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (55)
    RNASeq_FPKM (74)
    GO_annotation (14)
    Contained_in_operon: CEOP4500
    Ortholog (42)
    Paralog: WBGene00008948 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00008131 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable ATP binding activity; cytidine kinase activity; and uridine kinase activity. Predicted to be involved in phosphorylation and pyrimidine ribonucleotide biosynthetic process. Predicted to be located in cytoplasm. Human ortholog(s) of this gene implicated in pancreatic cancer. Is an ortholog of human UCK1 (uridine-cytidine kinase 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:1793 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:12562)
  Molecular_info: Corresponding_CDS: B0001.4a
      B0001.4c
    Corresponding_CDS_history: B0001.4:wp131
    Corresponding_transcript: B0001.4b
      B0001.4a.1
      B0001.4c.1
    Other_sequence (27)
    Associated_feature: WBsf998036
  Experimental_info: RNAi_result: WBRNAi00009542 Inferred_automatically: RNAi_primary
      WBRNAi00038634 Inferred_automatically: RNAi_primary
      WBRNAi00081720 Inferred_automatically: RNAi_primary
      WBRNAi00027937 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1029147
      Expr1033043
      Expr1142844
      Expr2000017
      Expr2018232
    Drives_construct: WBCnstr00034008
    Construct_product: WBCnstr00034008
    Microarray_results (21)
    Expression_cluster: WBPaper00031040:TGF-beta_adult_downregulated
      WBPaper00032031:DConiospora_upregulated_OligoArray_24h
      WBPaper00035269:cde-1_regulated
      WBPaper00037950:all-neurons_larva_enriched
      WBPaper00037950:AVA-neuron_embryo_enriched
      WBPaper00037950:bodywall-muscle_CoreEnriched
      WBPaper00037950:bodywall-muscle_embryo_enriched
      WBPaper00037950:bodywall-muscle_larva_enriched
      WBPaper00043951:insoluble_protein_day16_N2
      WBPaper00044501:gld-1_let-7_regulated
      WBPaper00044656:tatn-1(qd182)_downregulated
      WBPaper00044736:flat_dev_expression
      WBPaper00044760:germline_specific
      WBPaper00045521:Gender_Neutral
      WBPaper00048923:Aging_regulated
      WBPaper00048988:neuron_expressed
      WBPaper00049545:cco-1(RNAi)_upregulated
      WBPaper00049545:jmjd-3.1(+)_upregulated
      WBPaper00049545:rgef-1p-jmjd-1.2(+)_upregulated
      WBPaper00049545:sur-5p-jmjd-1.2(+)_upregulated
      WBPaper00050412:cco-1(RNAi)_upregulated_N2
      WBPaper00050488:adult_vs_dauer_regulated_N2_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_20C
      WBPaper00050488:mir-34(gk437)_vs_mir-34(OverExpression)_regulated_adult_25C
      WBPaper00050686:glp-1(e2141)_downregulated
      WBPaper00050726:OsmoticStress_regulated_NoFood
      WBPaper00050990:GABAergic-neuron_expressed
      WBPaper00050990:hypodermis_expressed
      WBPaper00050990:intestine_expressed
      WBPaper00051039:germline_enriched
      WBPaper00051245:epidermis_cytoplasm_expressed
      WBPaper00051265:F4_morc-1(tm6048)_upregulated
      WBPaper00052884:emb-4(hc60)_downregulated
      WBPaper00053184:sma-2(rax5)_downregulated
      WBPaper00053184:sma-4(rax3)_downregulated
      WBPaper00053302:zidovudine_24h_regulated
      WBPaper00053302:zidovudine_72h_regulated
      WBPaper00053321:PGCs_enriched_NuGen
      WBPaper00055648:germline_expressed
      WBPaper00055971:nhl-2(ok818)_25C_upregulated
      WBPaper00056161:male_enriched_siRNA
      WBPaper00056826:SGP_biased
      WBPaper00057288:Cold_upregulated_transcript
      WBPaper00057288:iff-1(RNAi)_upregulated_transcript
      WBPaper00058691:sin-3(tm1276)_upregulated
      WBPaper00059763:neuron_expressed
      WBPaper00061340:Intestinal_and_rectal_muscle
      WBPaper00061340:Rectal_cell
      WBPaper00061479:HDA-1_interacting_protein
      WBPaper00061527:hrdl-1_3731-lst-4_2238
      WBPaper00061527:trcs-2_5724-R11A8.7_17645
      WBPaper00062193:skn-1(RNAi)_upregulated
      WBPaper00062325:muscle_enriched_coding-RNA
      WBPaper00062354:H.zoospora_6h_regulated
      WBPaper00062554:MAGU-2_interacting
      WBPaper00062669:extracellular-vesicle_protein
      WBPaper00064071:NHR-49_interacting
      WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
      WBPaper00064716:paraquat_upregulated
      WBPaper00065975:P-body_vs_oocyte_enriched
      WBPaper00065975:P-body_vs_WholeAnimal_enriched
      WBPaper00065993:glp-1(e2141)_downregulated
      WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
      WBPaper00025032:cluster_1
      WBPaper00025032:cluster_78
      WBPaper00025141:N2_Expressed_Genes
      WBPaper00025141:unc-4::GFP_Enriched_Genes
      WBPaper00025141:unc-4::GFP_Expressed_Genes
      WBPaper00026929:sir-2.1_overexpression_regulated
      WBPaper00026980:intestine_enriched
      WBPaper00030839:Embryo_A_Class
      WBPaper00030839:Embryo_Pan_Neuronal
      WBPaper00030839:Larval_Pan_Neuronal
      WBPaper00031003:24hr_muscle_enriched
      WBPaper00031003:total_muscle_enriched
      WBPaper00031060:2-deoxy-D-glucose_upregulated
      WBPaper00031532:Larva_Pan_Neuronal_Enriched
      WBPaper00034739:N2moreDR1350
      WBPaper00035905:FBF-1_Associated
      WBPaper00036286:Pattern_F
      WBPaper00037901:GLD-1_mRNA_targets
      WBPaper00039866:ClassComp_daf-19_upregulated
      WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
      WBPaper00040963:TA300_down
      WBPaper00041606:CE_B.thuringiensis-DB27_regulated
      WBPaper00041606:CE_X.nematophila_regulated
      WBPaper00045263:0.1mM-paraquat_upregulated
      WBPaper00045263:nuo-6(qm200)_upregulated
      WBPaper00045960:L1-L4-lethargus_downregulated
      WBPaper00045960:L4-lethargus_downregulated
      WBPaper00047070:DAF-16-dependent_UV_response
      WBPaper00053236:Starvation_regulated_GR1307
      WBPaper00053550:daf-19(m86)_upregulated_3-fold-embryo
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_MD
      [cgc5767]:expression_class_MD_pd(66_min)
      [cgc5767]:expression_class_SM
      [cgc5767]:expression_class_SMD
      [cgc6390]:spermatogenesis-enriched
    Interaction (12)
  Map_info: Positive: Positive_clone: B0001 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV 5.73415
  Reference: WBPaper00035098
    WBPaper00038491
    WBPaper00044506
    WBPaper00055090
    WBPaper00061547
  Method: Gene