WormBase Tree Display for Gene: WBGene00006925

WBGene00006925 SMap: S_parent: Sequence: K09F5
  Identity: Version: 1
    Name: CGC_name: vit-1 Person_evidence: WBPerson71
      Sequence_name: K09F5.2
      Molecular_name: K09F5.2
        K09F5.2.1
        CE04746
      Other_name: CELE_K09F5.2 Accession_evidence: NDB BX284606
      Public_name: vit-1
    DB_info: Database: AceView gene XI345
        WormQTL gene WBGene00006925
        WormFlux gene WBGene00006925
        NDB locus_tag CELE_K09F5.2
        Panther gene CAEEL|WormBase=WBGene00006925|UniProtKB=P55155
          family PTHR23345
        NCBI gene 181034
        RefSeq protein NM_001381026.1
        SwissProt UniProtAcc P55155
        TREEFAM TREEFAM_ID TF332911
        UniProt_GCRP UniProtAcc P55155
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:43 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: vit
    Allele (110)
    Possibly_affected_by: WBVar02158569
    Legacy_information: Pseudogene 95% homologous to vit-2.
      [C.elegansII] NMK. Pseudogene with 95% similarity to vit-2; transcripts not detected. [Spieth et al. 1985b]
    Strain: WBStrain00032666
      WBStrain00047208
      WBStrain00054880
      WBStrain00052771
    RNASeq_FPKM (74)
    GO_annotation: 00048533
      00048534
      00048535
      00048536
      00115034
      00115035
    Ortholog (65)
    Paralog: WBGene00006927 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00006928 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00006929 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00006930 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00006926 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
    Structured_description: Automated_description: Predicted to enable lipid transporter activity. Predicted to be involved in lipid transport. Predicted to be located in extracellular region. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: K09F5.2
    Corresponding_transcript: K09F5.2.1
    Other_sequence (526)
    Associated_feature: WBsf1005939
      WBsf235969
      WBsf235970
  Experimental_info: RNAi_result: WBRNAi00034213 Inferred_automatically: RNAi_primary
      WBRNAi00114749 Inferred_automatically: RNAi_primary
      WBRNAi00001547 Inferred_automatically: RNAi_primary
      WBRNAi00114746 Inferred_automatically: RNAi_primary
      WBRNAi00114748 Inferred_automatically: RNAi_primary
      WBRNAi00114747 Inferred_automatically: RNAi_primary
      WBRNAi00050439 Inferred_automatically: RNAi_primary
      WBRNAi00115695 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr16160
      Expr1032942
      Expr1154146
      Expr2018000
      Expr2036136
    Drives_construct: WBCnstr00022705
      WBCnstr00034095
    Construct_product: WBCnstr00034095
    Microarray_results (16)
    Expression_cluster (418)
    Interaction (258)
  Map_info: Map: X Position: -1.31885
    Positive: Positive_clone: K09F5 Inferred_automatically: From sequence, transcript, pseudogene data
        YOLK2-3
    Pseudo_map_position
  Reference (35)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene