WormBase Tree Display for Gene: WBGene00006865
expand all nodes | collapse all nodes | view schema
| WBGene00006865 | SMap | S_parent | Sequence | CHROMOSOME_X | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | slcf-2 | Person_evidence | WBPerson261 | |||||
| WBPerson71 | |||||||||
| Sequence_name | ZK563.1 | ||||||||
| Molecular_name | ZK563.1 | ||||||||
| ZK563.1.1 | |||||||||
| CE46097 | |||||||||
| Other_name | uvt-7 | Person_evidence | WBPerson71 | ||||||
| CELE_ZK563.1 | Accession_evidence | NDB | BX284606 | ||||||
| Public_name | slcf-2 | ||||||||
| DB_info | Database | AceView | gene | XE13 | |||||
| WormQTL | gene | WBGene00006865 | |||||||
| WormFlux | gene | WBGene00006865 | |||||||
| NDB | locus_tag | CELE_ZK563.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00006865|UniProtKB=Q23535 | |||||||
| family | PTHR23503 | ||||||||
| NCBI | gene | 192084 | |||||||
| RefSeq | protein | NM_076185.4 | |||||||
| TrEMBL | UniProtAcc | Q23535 | |||||||
| UniProt_GCRP | UniProtAcc | Q23535 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:43 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 26 Sep 2008 15:49:39 | WBPerson2970 | Name_change | CGC_name | slcf-2 | ||||
| 3 | 26 Apr 2011 14:16:12 | WBPerson1849 | Event | Acquires_merge | WBGene00015452 | ||||
| Acquires_merge | WBGene00015452 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | slcf | ||||||||
| Allele (51) | |||||||||
| Legacy_information | Transcript present in embryos adult hermaphrodites. | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00078809 | ||||||||
| 00078810 | |||||||||
| 00078811 | |||||||||
| 00078812 | |||||||||
| 00078813 | |||||||||
| 00114945 | |||||||||
| 00114946 | |||||||||
| 00114947 | |||||||||
| Ortholog (36) | |||||||||
| Paralog (25) | |||||||||
| Structured_description | Concise_description | slcf-2 encodes a transmembrane permease of the major facilitator superfamily (MFS) that by homology, is predicted to transport metabolites across cellular membranes in response to chemiosmotic gradients; slcf-2 was first identified in molecular analyses of gene products linked to the vitellogenin (vit) loci on the X chromosome; slcf-2 mRNA is detected in embryos and adults, suggesting that slcf-2 may be a maternally expressed gene. | Paper_evidence | WBPaper00000873 | |||||
| WBPaper00005654 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 20 Apr 2011 00:00:00 | ||||||||
| Automated_description | Predicted to enable hexose transmembrane transporter activity. Predicted to be involved in monosaccharide transmembrane transport. Predicted to be located in membrane. Is an ortholog of several human genes including SLC2A11 (solute carrier family 2 member 11); SLC2A5 (solute carrier family 2 member 5); and SLC2A9 (solute carrier family 2 member 9). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | ZK563.1 | |||||||
| Corresponding_CDS_history | ZK563.1:wp225 | ||||||||
| Corresponding_transcript | ZK563.1.1 | ||||||||
| Other_sequence | MH02834 | ||||||||
| ACC05135_1 | |||||||||
| MH00820 | |||||||||
| CBC04717_1 | |||||||||
| MH02738 | |||||||||
| MHC00343_1 | |||||||||
| CJC04407_1 | |||||||||
| Acan_isotig09165 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00059517 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00010141 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00039651 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00028454 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00022061 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1243 | ||||||||
| Expr1023666 | |||||||||
| Expr1032909 | |||||||||
| Expr1162934 | |||||||||
| Expr2015880 | |||||||||
| Expr2034113 | |||||||||
| Drives_construct | WBCnstr00028839 | ||||||||
| Construct_product | WBCnstr00028839 | ||||||||
| Microarray_results (35) | |||||||||
| Expression_cluster (132) | |||||||||
| Interaction (30) | |||||||||
| Map_info | Map | X | Position | -10.3745 | |||||
| Positive | Positive_clone | ZK563 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00000873 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map X | ||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
