WormBase Tree Display for Gene: WBGene00006822
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| WBGene00006822 | SMap | S_parent | Sequence | C46F11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | unc-93 | Person_evidence | WBPerson261 | |||||
| Sequence_name | C46F11.1 | ||||||||
| Molecular_name | C46F11.1a | ||||||||
| C46F11.1a.1 | |||||||||
| CE30906 | |||||||||
| C46F11.1b | |||||||||
| CE37957 | |||||||||
| C46F11.1b.1 | |||||||||
| Other_name | CELE_C46F11.1 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | unc-93 | ||||||||
| DB_info | Database | WormQTL | gene | WBGene00006822 | |||||
| WormFlux | gene | WBGene00006822 | |||||||
| NDB | locus_tag | CELE_C46F11.1 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00006822|UniProtKB=Q93380 | |||||||
| family | PTHR19444 | ||||||||
| NCBI | gene | 175466 | |||||||
| RefSeq | protein | NM_001026047.5 | |||||||
| NM_001381807.1 | |||||||||
| SwissProt | UniProtAcc | Q93380 | |||||||
| TREEFAM | TREEFAM_ID | TF314905 | |||||||
| UniProt_GCRP | UniProtAcc | Q93380 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:43 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | unc | ||||||||
| Reference_allele | WBVar00144047 | ||||||||
| Allele (189) | |||||||||
| Legacy_information (4) | |||||||||
| Strain (31) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (16) | |||||||||
| Ortholog (39) | |||||||||
| Structured_description | Concise_description | unc-93 encodes a novel transmembrane protein that affects muscle contraction and egg laying; UNC-93 is predicted to be a component of a multi-protein complex containing the SUP-9 two-pore potassium channel and the SUP-10 transmembrane protein; an UNC-93::GFP fusion protein is expressed in body wall muscle membranes and dense bodies as well as in the vulval and intestinal muscles; neuronal UNC-93::GFP expression is found in the four SIA neurons that originate in the head, receive some synapses in the nerve ring, and extend posteriorly directed processes; in muscle cells, UNC-93::GFP colocalizes with SUP-9 to dense bodies and membranes. | Paper_evidence | WBPaper00000486 | |||||
| WBPaper00000564 | |||||||||
| WBPaper00001525 | |||||||||
| WBPaper00001800 | |||||||||
| WBPaper00006135 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| WBPerson324 | |||||||||
| Date_last_updated | 26 Jun 2008 00:00:00 | ||||||||
| Automated_description | Enables potassium channel regulator activity. Involved in regulation of muscle contraction and regulation of potassium ion transport. Located in plasma membrane and striated muscle dense body. Expressed in SIA; body wall musculature; and non-striated muscle. Is an ortholog of human UNC93A (unc-93 homolog A). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C46F11.1a | |||||||
| C46F11.1b | |||||||||
| Corresponding_CDS_history | C46F11.1:wp80 | ||||||||
| C46F11.1:wp138 | |||||||||
| C46F11.1:wp140 | |||||||||
| Corresponding_transcript | C46F11.1a.1 | ||||||||
| C46F11.1b.1 | |||||||||
| Other_sequence | FE914682.1 | ||||||||
| FE913923.1 | |||||||||
| Dviv_isotig29800 | |||||||||
| ASC31488_1 | |||||||||
| JI167429.1 | |||||||||
| Associated_feature | WBsf991851 | ||||||||
| WBsf991852 | |||||||||
| WBsf991853 | |||||||||
| WBsf991854 | |||||||||
| WBsf224634 | |||||||||
| Experimental_info | RNAi_result (12) | ||||||||
| Expr_pattern | Expr2773 | ||||||||
| Expr2775 | |||||||||
| Expr1019911 | |||||||||
| Expr1032886 | |||||||||
| Expr1146588 | |||||||||
| Expr2017919 | |||||||||
| Expr2036055 | |||||||||
| Drives_construct (19) | |||||||||
| Construct_product (23) | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (85) | |||||||||
| Interaction (54) | |||||||||
| Map_info | Map | III | Position | -5.0882 | Error | 0.020586 | |||
| Well_ordered | |||||||||
| Positive | Inside_rearr | nDf6 | |||||||
| nDf7 | |||||||||
| nDf8 | |||||||||
| nDf10 | |||||||||
| nDf11 | |||||||||
| nDf12 | |||||||||
| nDf13 | |||||||||
| nDf14 | |||||||||
| nDf15 | |||||||||
| Positive_clone | C46F11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| MT#JL932 | |||||||||
| Mapping_data | 2_point | 402 | |||||||
| 403 | |||||||||
| 6037 | |||||||||
| 6039 | |||||||||
| 6040 | |||||||||
| Multi_point (46) | |||||||||
| Pos_neg_data (11) | |||||||||
| Landmark_gene | |||||||||
| Reference (114) | |||||||||
| Method | Gene |
