WormBase Tree Display for Gene: WBGene00006659

WBGene00006659 Evidence: Person_evidence: WBPerson655
  SMap: S_parent: Sequence: CHROMOSOME_II
  Identity: Version: 1
    Name: CGC_name: twk-4 Person_evidence: WBPerson655
      Sequence_name: ZK1067.5
      Molecular_name: ZK1067.5
        ZK1067.5.1
        CE52341
      Other_name: twk-20 Person_evidence: WBPerson655
        CELE_ZK1067.5 Accession_evidence: NDB BX284602
      Public_name: twk-4
    DB_info: Database: AceView gene 2J480
        WormQTL gene WBGene00006659
        WormFlux gene WBGene00006659
        NDB locus_tag CELE_ZK1067.5
        Panther gene CAEEL|WormBase=WBGene00006659|UniProtKB=Q23386
          family PTHR11003
        NCBI gene 192079
        RefSeq protein NM_001356885.3
        TrEMBL UniProtAcc Q23386
        UniProt_GCRP UniProtAcc Q23386
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:41 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: twk
    Allele (238)
    Strain: WBStrain00051082
    RNASeq_FPKM (74)
    GO_annotation (11)
    Ortholog (20)
    Paralog (47)
    Structured_description: Automated_description: Predicted to enable outward rectifier potassium channel activity and potassium ion leak channel activity. Predicted to be involved in potassium ion transmembrane transport and stabilization of membrane potential. Predicted to be located in membrane. Expressed in sensory neurons. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: ZK1067.5
    Corresponding_CDS_history: ZK1067.5:wp193
      ZK1067.5:wp245
      ZK1067.5:wp261
    Corresponding_transcript: ZK1067.5.1
    Other_sequence (24)
    Associated_feature: WBsf665910
      WBsf988974
      WBsf988975
      WBsf988976
      WBsf988977
      WBsf988978
      WBsf1012823
  Experimental_info: RNAi_result: WBRNAi00062554 Inferred_automatically: RNAi_primary
      WBRNAi00095006 Inferred_automatically: RNAi_primary
      WBRNAi00062552 Inferred_automatically: RNAi_primary
      WBRNAi00022509 Inferred_automatically: RNAi_primary
      WBRNAi00038138 Inferred_automatically: RNAi_primary
      WBRNAi00062553 Inferred_automatically: RNAi_primary
      WBRNAi00059094 Inferred_automatically: RNAi_primary
      WBRNAi00059093 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1366
      Expr1024954
      Expr1162523
      Expr2017676
    Drives_construct: WBCnstr00010239
    Construct_product: WBCnstr00010239
    Microarray_results (33)
    Expression_cluster: WBPaper00037950:A-class-motor-neurons_L1-larva_expressed
      WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
      WBPaper00037950:all-neurons_L1-larva_expressed
      WBPaper00037950:all-neurons_L2-larva_expressed
      WBPaper00037950:AVA-neuron_L1-larva_expressed
      WBPaper00037950:AVE-neuron_L1-larva_expressed
      WBPaper00037950:BAG-neuron_blastula-embryo_expressed
      WBPaper00037950:bodywall-muscle_L2-larva_expressed
      WBPaper00037950:coelomocytes_L2-larva_expressed
      WBPaper00037950:excretory-cell_L2-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
      WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
      WBPaper00037950:glr-1(+)-neurons_L2-larva_expressed
      WBPaper00038438:E.faecalis_24hr_upregulated_RNAseq
      WBPaper00038438:Harposporium_24hr_downregulated_RNAseq
      WBPaper00038438:P.lumniescens_24hr_upregulated_RNAseq
      WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray
      WBPaper00042561:smg-2(RNAi)_upregulated
      WBPaper00045390:tunicamycin_downregulated
      WBPaper00045420:fertilization_downregulated_transcript
      WBPaper00048923:Aging_regulated
      WBPaper00048988:daf-2(e1370)_daf-16(mu86)_downregulated_neuron
      WBPaper00048988:neuron_expressed
      WBPaper00050726:OsmoticStress_regulated_Food
      WBPaper00053295:lin-22(ot269)_upregulated
      WBPaper00055626:pry-1(mu38)_downregulated
      WBPaper00058598:mex-1(or286)_upregulated
      WBPaper00058598:mex-3(eu149)_upregulated
      WBPaper00058598:spn-4(tm291)_upregulated
      WBPaper00060014:set-2(tm1630)_downregulated
      WBPaper00060445:nfki-1(cer1)_downregulated_L4
      WBPaper00060811:L1_vs_adult_upregulated_neural
      WBPaper00061081:E.faecalis_upregulated_N2
      WBPaper00061527:srj-21-srh-32
      WBPaper00061753:csr-1(tor159)_upregulated_25C
      WBPaper00062103:neuron_enriched
      WBPaper00062159:hda-2(ok1479)_upregulated
      WBPaper00062325:muscle_depleted_coding-RNA
      WBPaper00064532:pals-22(jy3)_upregulated
      WBPaper00064661:lpd-3(ok2138)_upregulated
      WBPaper00064933:bcf-1(ylf1)_upregulated_transcript
      WBPaper00065841:72_0
      WBPaper00065993:glp-1(e2141)_upregulated
      cgc4386_cluster_5_5
      cgc4489_group_11
      WBPaper00024393:strongly_regulated_dauer_genes
      WBPaper00026929:Resveratrol_regulated_daf-16
      WBPaper00029437:dcr-1_upregulated
      WBPaper00031003:0hr_muscle_depleted
      WBPaper00031003:total_muscle_depleted
      WBPaper00031184:acrylamide_upregulated
      WBPaper00031252:AIN-1_IP_enriched
      WBPaper00031252:AIN-2_IP_enriched
      WBPaper00031532:Larva_Pan_Neuronal_Depleted
      WBPaper00031832:slr-2_regulated
      WBPaper00032948:FedUp
      WBPaper00034739:N2lessDR1350
      WBPaper00035084:embryo_enriched_AIN-2_IP
      WBPaper00036130:mir-243_up_regulated
      WBPaper00036286:Pattern_C
      WBPaper00037695:WC_5-day
      WBPaper00040603:tdp-1(lf)_down_vs_N2_FC_1.2
      WBPaper00040858:eQTL_age_regulated_developing
      WBPaper00040858:eQTL_regulated_developing
      WBPaper00040858:eQTL_regulated_juvenile
      WBPaper00040963:Q100_down
      WBPaper00040963:Q200_down
      WBPaper00040985:AIN-2_asynchronous_intestine
      WBPaper00040985:AIN-2_L4_intestine
      WBPaper00041939:control_vs_EtBr-exposed_48h
      WBPaper00041939:control_vs_UVC-EtBr-exposed_48h
      WBPaper00041939:EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00041939:UVC-EtBr-exposed_vs_UVC-exposed_48h
      WBPaper00045263:isp-1(qm150)_downregulated
      WBPaper00045673:colistin_upregulated
      WBPaper00046548:dafachronic-acid_upregulated
      WBPaper00047070:N2_starvation_downregulated
      WBPaper00047070:N2_UV_upregulated
      WBPaper00048989:N2_rapamycin_upregulated
      WBPaper00053236:Starvation_regulated_N2
      WBPaper00056330:mrps-5(RNAi)_upregulated
      WBPaper00057098:SiO2-nanoparticles_upregulated
      [cgc5767]:expression_class_M
      [cgc5767]:expression_class_SM
      [cgc6390]:Cluster_B
    Interaction (66)
  Map_info: Map: II Position: 1.09342 Error: 0.000317
    Positive: Positive_clone: ZK1067 Inferred_automatically: From sequence, transcript, pseudogene data
        ZK1097 Inferred_automatically: From CDS info
    Pseudo_map_position
  Reference: WBPaper00026748
    WBPaper00038491
    WBPaper00055090
  Remark: twk-4 was connected to C40C9.1 Person_evidence: WBPerson655
    twk-4 was once linked to ZK1097.5 which was a typo Curator_confirmed: WBPerson1845
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene