WormBase Tree Display for Gene: WBGene00006642
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WBGene00006642 | SMap | S_parent | Sequence | F01E11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | tsp-16 | Person_evidence | WBPerson522 | |||||
Sequence_name | F01E11.4 | ||||||||
Molecular_name | F01E11.4 | ||||||||
F01E11.4.1 | |||||||||
CE47141 | |||||||||
Other_name | CELE_F01E11.4 | Accession_evidence | NDB | BX284606 | |||||
Public_name | tsp-16 | ||||||||
DB_info | Database | AceView | gene | XH612 | |||||
WormQTL | gene | WBGene00006642 | |||||||
WormFlux | gene | WBGene00006642 | |||||||
NDB | locus_tag | CELE_F01E11.4 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00006642|UniProtKB=Q19083 | |||||||
family | PTHR19282 | ||||||||
NCBI | gene | 192066 | |||||||
RefSeq | protein | NM_076782.4 | |||||||
TrEMBL | UniProtAcc | Q19083 | |||||||
UniProt_GCRP | UniProtAcc | Q19083 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 02 Mar 2018 10:40:21 | WBPerson4025 | Event | Split_into | WBGene00303051 | ||||
Split_into | WBGene00303051 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | tsp | ||||||||
Allele (37) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00063416 | ||||||||
00063417 | |||||||||
00114533 | |||||||||
Ortholog (29) | |||||||||
Paralog (20) | |||||||||
Structured_description | Automated_description | Predicted to be located in membrane. Is an ortholog of human UPK1B (uroplakin 1B). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F01E11.4 | |||||||
Corresponding_CDS_history | F01E11.4:wp230 | ||||||||
F01E11.4a:wp264 | |||||||||
F01E11.4b:wp264 | |||||||||
Corresponding_transcript | F01E11.4.1 | ||||||||
Other_sequence | FD515423.1 | ||||||||
CSC01824_1 | |||||||||
Associated_feature | WBsf670673 | ||||||||
Experimental_info | RNAi_result | WBRNAi00043738 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1026533 | ||||||||
Expr1147723 | |||||||||
Expr2017545 | |||||||||
Expr2035683 | |||||||||
Drives_construct | WBCnstr00034245 | ||||||||
Construct_product | WBCnstr00034245 | ||||||||
Microarray_results (15) | |||||||||
Expression_cluster (133) | |||||||||
Interaction | WBInteraction000206516 | ||||||||
WBInteraction000345967 | |||||||||
Map_info | Map | X | Position | -1.92965 | |||||
Positive | Positive_clone | F01E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |