WormBase Tree Display for Gene: WBGene00006642
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| WBGene00006642 | SMap | S_parent | Sequence | F01E11 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | tsp-16 | Person_evidence | WBPerson522 | |||||
| Sequence_name | F01E11.4 | ||||||||
| Molecular_name | F01E11.4 | ||||||||
| F01E11.4.1 | |||||||||
| CE47141 | |||||||||
| Other_name | CELE_F01E11.4 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | tsp-16 | ||||||||
| DB_info | Database | AceView | gene | XH612 | |||||
| WormQTL | gene | WBGene00006642 | |||||||
| WormFlux | gene | WBGene00006642 | |||||||
| NDB | locus_tag | CELE_F01E11.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00006642|UniProtKB=Q19083 | |||||||
| family | PTHR19282 | ||||||||
| NCBI | gene | 192066 | |||||||
| RefSeq | protein | NM_076782.4 | |||||||
| TrEMBL | UniProtAcc | Q19083 | |||||||
| UniProt_GCRP | UniProtAcc | Q19083 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:41 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 02 Mar 2018 10:40:21 | WBPerson4025 | Event | Split_into | WBGene00303051 | ||||
| Split_into | WBGene00303051 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tsp | ||||||||
| Allele | WBVar01815863 | ||||||||
| WBVar01499760 | |||||||||
| WBVar01499761 | |||||||||
| WBVar01601892 | |||||||||
| WBVar01157922 | |||||||||
| WBVar01157923 | |||||||||
| WBVar01157924 | |||||||||
| WBVar01157925 | |||||||||
| WBVar01157926 | |||||||||
| WBVar01157927 | |||||||||
| WBVar01157928 | |||||||||
| WBVar01157929 | |||||||||
| WBVar01157930 | |||||||||
| WBVar01157931 | |||||||||
| WBVar01157932 | |||||||||
| WBVar01157933 | |||||||||
| WBVar01157934 | |||||||||
| WBVar02139522 | |||||||||
| WBVar02064580 | |||||||||
| WBVar00035646 | |||||||||
| WBVar00035651 | |||||||||
| WBVar01469586 | |||||||||
| WBVar01469588 | |||||||||
| WBVar00035656 | |||||||||
| WBVar01469589 | |||||||||
| WBVar01882684 | |||||||||
| WBVar00035661 | |||||||||
| WBVar01882685 | |||||||||
| WBVar00507397 | |||||||||
| WBVar00507398 | |||||||||
| WBVar00507399 | |||||||||
| WBVar00507400 | |||||||||
| WBVar00507401 | |||||||||
| WBVar00507402 | |||||||||
| WBVar00507403 | |||||||||
| WBVar00507404 | |||||||||
| WBVar01500067 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00063416 | ||||||||
| 00063417 | |||||||||
| 00114533 | |||||||||
| Ortholog (29) | |||||||||
| Paralog (20) | |||||||||
| Structured_description | Automated_description | Predicted to be located in membrane. Is an ortholog of human UPK1B (uroplakin 1B). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F01E11.4 | |||||||
| Corresponding_CDS_history | F01E11.4:wp230 | ||||||||
| F01E11.4a:wp264 | |||||||||
| F01E11.4b:wp264 | |||||||||
| Corresponding_transcript | F01E11.4.1 | ||||||||
| Other_sequence | FD515423.1 | ||||||||
| CSC01824_1 | |||||||||
| Associated_feature | WBsf670673 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00043738 | Inferred_automatically | RNAi_primary | |||||
| Expr_pattern | Expr1026533 | ||||||||
| Expr1147723 | |||||||||
| Expr2017545 | |||||||||
| Expr2035683 | |||||||||
| Drives_construct | WBCnstr00034245 | ||||||||
| Construct_product | WBCnstr00034245 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (133) | |||||||||
| Interaction | WBInteraction000206516 | ||||||||
| WBInteraction000345967 | |||||||||
| Map_info | Map | X | Position | -1.92965 | |||||
| Positive | Positive_clone | F01E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
