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WormBase Tree Display for Gene: WBGene00006542

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Name Class

WBGene00006542SMapS_parentSequenceT20B12
IdentityVersion1
NameCGC_nametbp-1
Sequence_nameT20B12.2
Molecular_nameT20B12.2
T20B12.2.1
CE01408
Other_nameTBPAccession_evidenceEMBLL07754
3H475Accession_evidenceEMBLAF303249
CELE_T20B12.2Accession_evidenceNDBBX284603
Public_nametbp-1
DB_infoDatabase (11)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:40WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_info (11)
Disease_infoPotential_modelDOID:10652Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11588)
DOID:9744Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11588)
DOID:0050967Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11588)
DOID:0050847Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11588)
DOID:12858Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11588)
DOID:0060892Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11588)
DOID:5419Homo sapiensInferred_automaticallyInferred by orthology to human genes with DO annotation (HGNC:11588)
Molecular_infoCorresponding_CDST20B12.2
Corresponding_transcriptT20B12.2.1
Other_sequence (40)
Associated_featureWBsf225245
WBsf225246
Transcription_factorWBTranscriptionFactor000206
WBTranscriptionFactor000207
Experimental_infoRNAi_result (50)
Expr_patternExpr14301
Expr1023613
Expr1032690
Expr1157141
Expr2017345
Expr2035481
Drives_constructWBCnstr00034311
WBCnstr00040709
Construct_productWBCnstr00034311
WBCnstr00040709
AntibodyWBAntibody00000316
Microarray_results (22)
Expression_clusterWBPaper00031040:TGF-beta_adult_downregulated
WBPaper00035269:cde-1_regulated
WBPaper00037950:A-class-motor-neurons_L2-larva_expressed
WBPaper00037950:all-neurons_L2-larva_expressed
WBPaper00037950:AVA-neuron_L1-larva_expressed
WBPaper00037950:BAG-neuron_blastula-embryo_expressed
WBPaper00037950:bodywall-muscle_L2-larva_expressed
WBPaper00037950:CEP-sheath-cells_Day1-adult_expressed
WBPaper00037950:dopaminergic-neurons_L3-L4-larva_expressed
WBPaper00037950:excretory-cell_L2-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L1-larva_expressed
WBPaper00037950:GABAergic-motor-neurons_L2-larva_expressed
WBPaper00037950:germline-precursors_blastula-embryo_expressed
WBPaper00037950:hypodermis_L3-L4-larva_expressed
WBPaper00037950:intestine_L2-larva_expressed
WBPaper00037950:PVD-OLL-neurons_L3-L4-larva_expressed
WBPaper00041222:hlh-1(cc561)_downregulated
WBPaper00041222:unc-120(st364)_downregulated
WBPaper00044501:gld-1_let-7_regulated
WBPaper00044656:tatn-1(qd182)_downregulated
WBPaper00044736:flat_dev_expression
WBPaper00044786:emr-1(RNAi);lem-2(tm1582)_downregulated
WBPaper00045521:Gender_Neutral
WBPaper00045571:germline-ablation_downregulated
WBPaper00045729:gld-2(RNAi)_downregulated
WBPaper00048923:Aging_regulated
WBPaper00048988:neuron_expressed
WBPaper00049942:hsf-1(RNAi)_upregulated
WBPaper00050182:lmn-1(L535P)_downregulated
WBPaper00050488:adult_vs_dauer_regulated_N2_20C
WBPaper00050859:downregulated_P-granule(-)GFP(+)_vs_control_day2-adult
WBPaper00050990:GABAergic-neuron_expressed
WBPaper00050990:hypodermis_expressed
WBPaper00050990:intestine_expressed
WBPaper00050990:seam_expressed
WBPaper00051039:germline_enriched
WBPaper00051265:F4_morc-1(tm6048)_upregulated
WBPaper00052884:emb-4(hc60)_downregulated
WBPaper00053184:sma-4(rax3)_downregulated
WBPaper00053302:zidovudine_72h_regulated
WBPaper00053388:dauer_regulated_Cluster2
WBPaper00055354:Rapamycin-Rifampicin-Psora_downregulated
WBPaper00055648:germline_expressed
WBPaper00055862:antimycin_damt-1(gk961032)_regulated
WBPaper00055971:nhl-2(ok818)_25C_upregulated
WBPaper00056090:E.faecalis_downregulated_hpx-2(dg047)
WBPaper00056139:soil-microbiota_downregulated
WBPaper00056293:rpl-5(0)-rpl-33(0)_upregulated
WBPaper00056471:aak-1(tm1944);aak-2(ok524)_downregulated
WBPaper00056826:SGP_biased
WBPaper00058598:sin-3(tm1276)_upregulated
WBPaper00058691:cfp-1(tm6369)_upregulated
WBPaper00058691:sin-3(tm1276)_upregulated
WBPaper00059664:srbc-48(ac23)_downregulated
WBPaper00060014:set-2(tm1630)_upregulated
WBPaper00060661:sensory-neuron_depleted
WBPaper00060683:hlh-11(ko1)_downregulated
WBPaper00060909:atfs-1(cmh15)_upregulated
WBPaper00061203:sin-3(tm1276)_downregulated
WBPaper00061203:spr-1(ok2144)_downregulated
WBPaper00061527:F31C3.4_6048-cutc-1_15804
WBPaper00062159:hda-2(ok1479)_downregulated
WBPaper00062193:skn-1(RNAi)_upregulated
WBPaper00062325:muscle_enriched_coding-RNA
WBPaper00062498:PPM-1.D_interacting
WBPaper00064071:NHR-49_interacting
WBPaper00064080:miR-58_miRNA_interacting
WBPaper00064088:Day-3-adult_vs_L4_upregulated_fem-3(q20)
WBPaper00064716:paraquat_upregulated
WBPaper00065096:Day10_vs_Day1_upregulated
WBPaper00065373:Cisplatin_downregulated_WT
WBPaper00065373:sek-1(km4)_upregulated_cisplatin
WBPaper00065975:P-body_vs_WholeAnimal_enriched
WBPaper00065993:glp-1(e2141)_downregulated
WBPaper00066110:tetraploid_vs_diploid_downregulated
WBPaper00066146:germline-inx-14(RNAi)_downregulated_PA14
cgc4489_group_2
WBPaper00025032:cluster_1
WBPaper00025141:N2_Expressed_Genes
WBPaper00025141:unc-4::GFP_Expressed_Genes
WBPaper00026929:sir-2.1_overexpression_regulated
WBPaper00032165:differentially_expressed_with_age_medoid_5
WBPaper00035873:dpy-9_regulated
WBPaper00035873:dpy-10_regulated
WBPaper00036130:mir-243_down_regulated
WBPaper00036286:Pattern_F
WBPaper00037147:heatshock_upregulated
WBPaper00040858:eQTL_age_regulated_aging
WBPaper00040858:eQTL_regulated_aging
WBPaper00040858:eQTL_regulated_juvenile
WBPaper00040858:eQTL_regulated_reproductive
WBPaper00040963:TA200_down
WBPaper00040963:TA300_down
WBPaper00041002:HF_3d_0.2mM_Down
WBPaper00041002:HF_3d_2.0mM_Down
WBPaper00041606:CE_X.nematophila_regulated
WBPaper00041939:EtBr-exposed_vs_UVC-exposed_51h
WBPaper00045263:0.1mM-paraquat_upregulated
WBPaper00048989:eat-2(ad465)_rapamycin_upregulated
WBPaper00048989:N2_rapamycin_downregulated
WBPaper00053236:Starvation_regulated_GR1307
WBPaper00053236:Starvation_regulated_N2
WBPaper00057098:SiO2-nanoparticles_upregulated
[cgc5767]:cluster_1
[cgc5767]:expression_class_M
[cgc5767]:expression_class_SM
[cgc6390]:Cluster_E
[cgc6390]:oogenesis-enriched
Interaction (279)
Map_infoMapIIIPosition-0.737059Error0.00148
PositivePositive_cloneT20B12Inferred_automaticallyFrom sequence, transcript, pseudogene data
Mapping_dataMulti_point4724
5263
Pseudo_map_position
Reference (15)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene