WormBase Tree Display for Gene: WBGene00006508
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| WBGene00006508 | SMap | S_parent | Sequence | CHROMOSOME_I | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 4 | |||||||
| Name | CGC_name | tns-1 | Person_evidence | WBPerson4023 | |||||
| Sequence_name | M01E11.7 | ||||||||
| Molecular_name (26) | |||||||||
| Other_name | tag-83 | Person_evidence | WBPerson201 | ||||||
| tag-163 | Person_evidence | WBPerson201 | |||||||
| Author_evidence | |||||||||
| CELE_M01E11.7 | Accession_evidence | NDB | BX284601 | ||||||
| Public_name | tns-1 | ||||||||
| DB_info | Database (13) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 30 Oct 2015 16:57:17 | WBPerson1983 | Event | Acquires_merge | WBGene00044422 | ||||
| 3 | 30 Oct 2015 16:57:17 | WBPerson1983 | Event | Acquires_merge | WBGene00006456 | ||||
| 4 | 05 Nov 2015 11:56:49 | WBPerson2970 | Name_change | CGC_name | tns-1 | ||||
| Other_name | tag-163 | ||||||||
| Acquires_merge | WBGene00006456 | ||||||||
| WBGene00044422 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | tns | ||||||||
| Allele (233) | |||||||||
| Strain | WBStrain00001427 | ||||||||
| WBStrain00037181 | |||||||||
| WBStrain00035750 | |||||||||
| WBStrain00035825 | |||||||||
| WBStrain00037455 | |||||||||
| WBStrain00055333 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (57) | |||||||||
| Paralog | WBGene00020867 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Automated_description | Predicted to enable protein tyrosine phosphatase activity. Involved in positive regulation of axon regeneration. Located in axon. Expressed in DD neuron; VD neuron; head; and intestinal muscle. Is an ortholog of human TNS1 (tensin 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | M01E11.7a | |||||||
| M01E11.7b | |||||||||
| M01E11.7c | |||||||||
| M01E11.7d | |||||||||
| M01E11.7e | |||||||||
| M01E11.7f | |||||||||
| M01E11.7g | |||||||||
| M01E11.7h | |||||||||
| Corresponding_CDS_history | M01E11.7a:wp251 | ||||||||
| Corresponding_transcript | M01E11.7a.1 | ||||||||
| M01E11.7b.1 | |||||||||
| M01E11.7c.1 | |||||||||
| M01E11.7c.2 | |||||||||
| M01E11.7c.3 | |||||||||
| M01E11.7d.1 | |||||||||
| M01E11.7e.1 | |||||||||
| M01E11.7f.1 | |||||||||
| M01E11.7g.1 | |||||||||
| M01E11.7h.1 | |||||||||
| Other_sequence (36) | |||||||||
| Associated_feature (26) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00109239 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00050758 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00047532 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00109336 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00109433 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00004009 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00109627 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00109530 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00003685 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034355 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern (16) | |||||||||
| Drives_construct | WBCnstr00002135 | ||||||||
| WBCnstr00003559 | |||||||||
| WBCnstr00004229 | |||||||||
| WBCnstr00037893 | |||||||||
| WBCnstr00041423 | |||||||||
| Construct_product | WBCnstr00013933 | ||||||||
| WBCnstr00037893 | |||||||||
| Microarray_results (74) | |||||||||
| Expression_cluster (202) | |||||||||
| Interaction (41) | |||||||||
| Map_info | Map | I | Position | 0.246418 | |||||
| Positive | Positive_clone | M01E11 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4213 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038444 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00056803 | |||||||||
| WBPaper00058449 | |||||||||
| WBPaper00064400 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| [140923 pad] Modified Map position as it was a reverse physical that could not be fixed by automated methods. | |||||||||
| Method | Gene |
