WormBase Tree Display for Gene: WBGene00006392
expand all nodes | collapse all nodes | view schema
| WBGene00006392 | SMap | S_parent | Sequence | K03B4 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | taf-10 | |||||||
| Sequence_name | K03B4.3 | ||||||||
| Molecular_name | K03B4.3a | ||||||||
| K03B4.3a.1 | |||||||||
| CE07323 | |||||||||
| K03B4.3b | |||||||||
| CE28580 | |||||||||
| K03B4.3b.1 | |||||||||
| Other_name | CELE_K03B4.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | taf-10 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | taf | ||||||||
| Allele (13) | |||||||||
| Strain | WBStrain00036445 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (15) | |||||||||
| Contained_in_operon | CEOP5060 | ||||||||
| Ortholog (34) | |||||||||
| Structured_description | Automated_description | Predicted to enable promoter-specific chromatin binding activity. Predicted to contribute to RNA polymerase II general transcription initiation factor activity. Involved in embryo development; positive regulation of transcription by RNA polymerase II; and regulation of mitotic cell cycle, embryonic. Located in nucleus. Is an ortholog of human TAF10 (TATA-box binding protein associated factor 10). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | K03B4.3a | |||||||
| K03B4.3b | |||||||||
| Corresponding_transcript | K03B4.3a.1 | ||||||||
| K03B4.3b.1 | |||||||||
| Other_sequence (35) | |||||||||
| Associated_feature | WBsf646770 | ||||||||
| WBsf981921 | |||||||||
| WBsf999851 | |||||||||
| WBsf1019536 | |||||||||
| WBsf231680 | |||||||||
| Transcription_factor | WBTranscriptionFactor000206 | ||||||||
| WBTranscriptionFactor000383 | |||||||||
| Experimental_info | RNAi_result (29) | ||||||||
| Expr_pattern | Expr1028859 | ||||||||
| Expr1032589 | |||||||||
| Expr1153507 | |||||||||
| Expr2017205 | |||||||||
| Expr2035341 | |||||||||
| Drives_construct | WBCnstr00034375 | ||||||||
| Construct_product | WBCnstr00034375 | ||||||||
| Antibody | WBAntibody00000410 | ||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (93) | |||||||||
| Interaction (92) | |||||||||
| Map_info | Map | V | Position | -4.6992 | Error | 0.01921 | |||
| Positive | Positive_clone | K03B4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00004890 | ||||||||
| WBPaper00005725 | |||||||||
| WBPaper00006475 | |||||||||
| WBPaper00018966 | |||||||||
| WBPaper00027309 | |||||||||
| WBPaper00029038 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Sequence connection from [source: A Walker] | ||||||||
| This gene was previously called taf-11 [krb 020614] | |||||||||
| Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
