WormBase Tree Display for Gene: WBGene00006392
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WBGene00006392 | SMap | S_parent | Sequence | K03B4 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | taf | ||||||
Allele (13) | |||||||
Strain | WBStrain00036445 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (15) | |||||||
Contained_in_operon | CEOP5060 | ||||||
Ortholog (34) | |||||||
Structured_description | Automated_description | Predicted to enable promoter-specific chromatin binding activity. Predicted to contribute to RNA polymerase II general transcription initiation factor activity. Involved in embryo development; positive regulation of transcription by RNA polymerase II; and regulation of mitotic cell cycle, embryonic. Located in nucleus. Is an ortholog of human TAF10 (TATA-box binding protein associated factor 10). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | K03B4.3a | |||||
K03B4.3b | |||||||
Corresponding_transcript | K03B4.3a.1 | ||||||
K03B4.3b.1 | |||||||
Other_sequence (35) | |||||||
Associated_feature | WBsf646770 | ||||||
WBsf981921 | |||||||
WBsf999851 | |||||||
WBsf1019536 | |||||||
WBsf231680 | |||||||
Transcription_factor | WBTranscriptionFactor000206 | ||||||
WBTranscriptionFactor000383 | |||||||
Experimental_info | RNAi_result (29) | ||||||
Expr_pattern | Expr1028859 | ||||||
Expr1032589 | |||||||
Expr1153507 | |||||||
Expr2017205 | |||||||
Expr2035341 | |||||||
Drives_construct | WBCnstr00034375 | ||||||
Construct_product | WBCnstr00034375 | ||||||
Antibody | WBAntibody00000410 | ||||||
Microarray_results (25) | |||||||
Expression_cluster (93) | |||||||
Interaction (92) | |||||||
Map_info | Map | V | Position | -4.6992 | Error | 0.01921 | |
Positive | Positive_clone | K03B4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00004890 | ||||||
WBPaper00005725 | |||||||
WBPaper00006475 | |||||||
WBPaper00018966 | |||||||
WBPaper00027309 | |||||||
WBPaper00029038 | |||||||
WBPaper00038491 | |||||||
WBPaper00055090 | |||||||
Remark | Sequence connection from [source: A Walker] | ||||||
This gene was previously called taf-11 [krb 020614] | |||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||
Method | Gene |