WormBase Tree Display for Gene: WBGene00006392
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WBGene00006392 | SMap | S_parent | Sequence | K03B4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | CGC_name | taf-10 | |||||||
Sequence_name | K03B4.3 | ||||||||
Molecular_name | K03B4.3a | ||||||||
K03B4.3a.1 | |||||||||
CE07323 | |||||||||
K03B4.3b | |||||||||
CE28580 | |||||||||
K03B4.3b.1 | |||||||||
Other_name | CELE_K03B4.3 | Accession_evidence | NDB | BX284605 | |||||
Public_name | taf-10 | ||||||||
DB_info | Database (11) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | taf | ||||||||
Allele (13) | |||||||||
Strain | WBStrain00036445 | ||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (15) | |||||||||
Contained_in_operon | CEOP5060 | ||||||||
Ortholog (34) | |||||||||
Structured_description | Automated_description | Predicted to enable promoter-specific chromatin binding activity. Predicted to contribute to RNA polymerase II general transcription initiation factor activity. Involved in embryo development; positive regulation of transcription by RNA polymerase II; and regulation of mitotic cell cycle, embryonic. Located in nucleus. Is an ortholog of human TAF10 (TATA-box binding protein associated factor 10). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed (2) | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | K03B4.3a | |||||||
K03B4.3b | |||||||||
Corresponding_transcript | K03B4.3a.1 | ||||||||
K03B4.3b.1 | |||||||||
Other_sequence (35) | |||||||||
Associated_feature | WBsf646770 | ||||||||
WBsf981921 | |||||||||
WBsf999851 | |||||||||
WBsf1019536 | |||||||||
WBsf231680 | |||||||||
Transcription_factor | WBTranscriptionFactor000206 | ||||||||
WBTranscriptionFactor000383 | |||||||||
Experimental_info | RNAi_result (29) | ||||||||
Expr_pattern | Expr1028859 | ||||||||
Expr1032589 | |||||||||
Expr1153507 | |||||||||
Expr2017205 | |||||||||
Expr2035341 | |||||||||
Drives_construct | WBCnstr00034375 | ||||||||
Construct_product | WBCnstr00034375 | ||||||||
Antibody | WBAntibody00000410 | ||||||||
Microarray_results (25) | |||||||||
Expression_cluster (93) | |||||||||
Interaction (92) | |||||||||
Map_info | Map | V | Position | -4.6992 | Error | 0.01921 | |||
Positive | Positive_clone | K03B4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00004890 | ||||||||
WBPaper00005725 | |||||||||
WBPaper00006475 | |||||||||
WBPaper00018966 | |||||||||
WBPaper00027309 | |||||||||
WBPaper00029038 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00055090 | |||||||||
Remark | Sequence connection from [source: A Walker] | ||||||||
This gene was previously called taf-11 [krb 020614] | |||||||||
Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
Method | Gene |