WormBase Tree Display for Gene: WBGene00006382

WBGene00006382 SMap: S_parent: Sequence: CHROMOSOME_I
  Identity: Version: 1
    Name: CGC_name: taf-1
      Sequence_name: W04A8.7
      Molecular_name: W04A8.7a
        W04A8.7a.1
        CE42634
        W04A8.7b
        CE54397
        W04A8.7b.1
      Other_name: Y71A12B.b Curator_confirmed: WBPerson1983
          Remark: Old cosmid naming mapped via unique overlapping PCR_product on CDSs
        CELE_W04A8.7 Accession_evidence: NDB BX284601
      Public_name: taf-1
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:40 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: taf
    Allele: WBVar00161420
      WBVar00687836
      WBVar01354023
      WBVar00687837
      WBVar00161421
      WBVar00687838
      WBVar00542499
      WBVar00161422
      WBVar00687839
      WBVar00542500
      WBVar00161423
      WBVar01354034
      WBVar00687840
      WBVar00161424
      WBVar00161425
      WBVar00687841
      WBVar00351201
      WBVar00161426
      WBVar00351202
      WBVar00687842
      WBVar00161427
      WBVar00687843
      WBVar01354046
      WBVar00351203
      WBVar00161428
      WBVar01354057
      WBVar00351204
      WBVar00687844
      WBVar00351205
      WBVar00161429
      WBVar00687845
      WBVar00687846
      WBVar00161430
      WBVar01354068
      WBVar00351206
      WBVar00161431
      WBVar00351207
      WBVar01354079
      WBVar00687847
      WBVar00687848
      WBVar01354090
      WBVar00351208
      WBVar00161432
      WBVar01890841
      WBVar00351209
      WBVar00687849
      WBVar00161433
      WBVar00351210
      WBVar01890842
      WBVar00161434
      WBVar00687850
      WBVar00351211
      WBVar01890843
      WBVar00161435
      WBVar00687851
      WBVar00687852
      WBVar00351212
      WBVar00319627
      WBVar01890844
      WBVar00161436
      WBVar01233351
      WBVar00687853
      WBVar00351213
      WBVar01890845
      WBVar00161437
      WBVar00687854
      WBVar00161438
      WBVar00351214
      WBVar00351215
      WBVar00687855
      WBVar00161439
      WBVar00687856
      WBVar00351216
      WBVar00161440
      WBVar00687857
      WBVar00351217
      WBVar00161441
      WBVar00351218
      WBVar00687858
      WBVar00161442
      WBVar00161443
      WBVar00351219
      WBVar00687859
      WBVar00161444
      WBVar00351220
      WBVar00250644
      WBVar00687860
      WBVar00687861
      WBVar00351221
      WBVar00161445
      WBVar01233363
      WBVar00687862
      WBVar00161446
      WBVar00351222
      WBVar00687863
      WBVar00351223
      WBVar01982187
      WBVar00687864
      WBVar00351224
      WBVar00687865
      WBVar01476544
      WBVar00351225
      WBVar01476545
      WBVar00351226
      WBVar00687866
      WBVar01476546
      WBVar00351227
      WBVar00687867
      WBVar00351228
      WBVar00687868
      WBVar01476547
      WBVar00351229
      WBVar01233374
      WBVar02066727
      WBVar00687869
      WBVar02066728
      WBVar01915155
      WBVar00687870
      WBVar00351230
      WBVar02066729
      WBVar00687871
      WBVar01915156
      WBVar00351231
      WBVar02066730
      WBVar00687872
      WBVar01915157
      WBVar00351232
      WBVar02066731
      WBVar00687873
      WBVar00351233
      WBVar01915158
      WBVar00351234
      WBVar00687874
      WBVar01915159
      WBVar00687875
      WBVar01915160
      WBVar00351235
      WBVar01499739
      WBVar00687876
      WBVar01915163
      WBVar00351236
      WBVar00351237
      WBVar01915165
      WBVar00687877
      WBVar00307567
      WBVar01915166
      WBVar00351238
      WBVar00687878
      WBVar01915167
      WBVar02073073
      WBVar00687879
      WBVar00351239
      WBVar01233385
      WBVar01915168
      WBVar00687880
      WBVar00351240
      WBVar00687881
      WBVar01915169
      WBVar00351241
      WBVar01900360
      WBVar01915170
      WBVar00351242
      WBVar00687882
      WBVar00351243
      WBVar01915171
      WBVar00687883
      WBVar00351244
      WBVar01915172
      WBVar00687884
      WBVar01915173
      WBVar02075499
      WBVar00351245
      WBVar00687885
      WBVar01993704
      WBVar00687886
      WBVar01915174
      WBVar00351246
      WBVar00687887
      WBVar00687888
      WBVar00687889
      WBVar01233396
      WBVar00687890
      WBVar00687891
      WBVar00687892
      WBVar00687893
      WBVar01289256
      WBVar00687894
      WBVar00687895
      WBVar00687896
      WBVar01233407
      WBVar00687897
      WBVar01494425
      WBVar00687898
      WBVar00687899
      WBVar01502155
      WBVar01898169
      WBVar01502156
      WBVar00687900
      WBVar00687901
      WBVar01502157
      WBVar01898170
      WBVar02128957
      WBVar01502158
      WBVar00687902
      WBVar02128958
      WBVar01898171
      WBVar00687903
      WBVar02128959
      WBVar01502159
      WBVar01233418
      WBVar01434660
      WBVar00317758
      WBVar02128960
      WBVar01502160
      WBVar01434661
      WBVar00687904
      WBVar01502161
      WBVar01488912
      WBVar01434662
      WBVar00687905
      WBVar01434665
      WBVar01502162
      WBVar00687906
      WBVar01502163
      WBVar00687907
      WBVar01434666
      WBVar01434668
      WBVar01502164
      WBVar00687908
      WBVar01434669
      WBVar00687909
      WBVar01502165
      WBVar01502166
      WBVar00687910
      WBVar01434670
      WBVar01817553
      WBVar00687911
      WBVar01233429
      WBVar01434671
      WBVar01502167
      WBVar00687912
      WBVar01502168
      WBVar01434672
      WBVar01502169
      WBVar01434673
      WBVar00687913
      WBVar02002437
      WBVar01502170
      WBVar02002438
      WBVar01434674
      WBVar00687914
      WBVar01434675
      WBVar01502171
      WBVar01233440
      WBVar00687915
      WBVar01502172
      WBVar00687916
      WBVar01502173
      WBVar00687917
      WBVar01714470
      WBVar01714471
      WBVar01502174
      WBVar00687918
      WBVar01714472
      WBVar00687919
      WBVar01502175
      WBVar01714473
      WBVar01233451
      WBVar01714474
      WBVar01714475
      WBVar01714476
      WBVar01714477
      WBVar01233462
      WBVar01714478
      WBVar02046960
      WBVar00260848
      WBVar00260849
      WBVar00254412
      WBVar01694926
      WBVar01694927
      WBVar01499999
      WBVar02016802
      WBVar01681468
      WBVar02016803
      WBVar01681469
      WBVar02006283
      WBVar02016804
      WBVar01958649
      WBVar02016805
      WBVar02016806
      WBVar01499823
      WBVar02016807
      WBVar02016808
      WBVar01943179
      WBVar01495044
      WBVar01948376
      WBVar01835387
      WBVar01948377
      WBVar01948378
      WBVar01948379
      WBVar01948381
      WBVar01693849
      WBVar01948382
      WBVar01557314
      WBVar01557315
      WBVar01902479
      WBVar01948383
      WBVar01948384
      WBVar01557316
      WBVar01948385
      WBVar01557317
      WBVar01557318
      WBVar01948386
      WBVar01557319
      WBVar01948388
      WBVar01355347
      WBVar01557320
      WBVar01948389
      WBVar01355353
      WBVar01948391
      WBVar01557321
      WBVar01557322
      WBVar01948392
      WBVar01557323
      WBVar01355372
      WBVar01557324
      WBVar00246613
      WBVar01355373
      WBVar01557325
      WBVar01355374
      WBVar01557326
      WBVar00246614
      WBVar02070566
      WBVar00316131
      WBVar01574509
      WBVar01574510
      WBVar00265327
      WBVar01498939
      WBVar00161396
      WBVar00161397
      WBVar01399324
      WBVar02080643
      WBVar00161398
      WBVar00687814
      WBVar00161399
      WBVar02080644
      WBVar00687815
      WBVar00161400
      WBVar00687816
      WBVar02080645
      WBVar01353957
      WBVar00687817
      WBVar00161401
      WBVar00687818
      WBVar00161402
      WBVar00161403
      WBVar00687819
      WBVar00687820
      WBVar00161404
      WBVar00687821
      WBVar00161405
      WBVar00687822
      WBVar00161406
      WBVar00687823
      WBVar00161407
      WBVar00687824
      WBVar00161408
      WBVar01353968
      WBVar02028537
      WBVar00687825
      WBVar00161409
      WBVar00161410
      WBVar00687826
      WBVar01704967
      WBVar00161411
      WBVar00251716
      WBVar00687827
      WBVar00687828
      WBVar00161412
      WBVar01353979
      WBVar00161413
      WBVar00687829
      WBVar01353990
      WBVar00687830
      WBVar00161414
      WBVar01354001
      WBVar00161415
      WBVar00687831
      WBVar00161416
      WBVar01354012
      WBVar00687832
      WBVar00687833
      WBVar00161417
      WBVar00161418
      WBVar00687834
      WBVar00161419
      WBVar00687835
    RNASeq_FPKM (74)
    GO_annotation (23)
    Contained_in_operon: CEOP1728
    Ortholog (42)
    Structured_description: Concise_description: The taf-1 gene encodes an ortholog of human TATA-binding protein associated factor TAF1L (TAFII250) that possesses histone acetyl transferase (HAT) activity and is a component of the TFIID general transcription factor that recognizes the transcription start site; TAF-1 is required for proper embryonic and larval development. Paper_evidence: WBPaper00004402
            WBPaper00004890
            WBPaper00005654
          Curator_confirmed: WBPerson1843
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Predicted to enable several functions, including RNA polymerase II general transcription initiation factor activity; TBP-class protein binding activity; and histone acetyltransferase activity. Predicted to contribute to transcription cis-regulatory region binding activity. Involved in embryo development and transcription initiation at RNA polymerase II promoter. Located in nucleus. Human ortholog(s) of this gene implicated in X-linked dystonia-parkinsonism and syndromic X-linked intellectual disability. Is an ortholog of human TAF1L (TATA-box binding protein associated factor 1 like). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0090057 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11535)
      DOID:0060309 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11535)
  Molecular_info: Corresponding_CDS: W04A8.7a
      W04A8.7b
    Corresponding_CDS_history: W04A8.7:wp20
      W04A8.7:wp191
    Corresponding_transcript: W04A8.7a.1
      W04A8.7b.1
    Other_sequence (53)
    Associated_feature: WBsf643820
      WBsf657050
      WBsf985962
      WBsf985963
      WBsf985964
      WBsf1011126
      WBsf1011127
      WBsf218758
    Transcription_factor: WBTranscriptionFactor000206
      WBTranscriptionFactor000421
  Experimental_info: RNAi_result (32)
    Expr_pattern: Expr1027270
      Expr1032579
      Expr1158287
      Expr2017211
      Expr2035347
    Antibody: WBAntibody00000731
    Microarray_results (23)
    Expression_cluster (114)
    Interaction (177)
  Map_info: Map: I Position: 22.0627 Error: 0.064158
    Positive: Positive_clone: W04A8 Inferred_automatically: From sequence, transcript, pseudogene data
    Mapping_data: Multi_point: 4888
        4903
        5555
    Pseudo_map_position
  Reference (14)
  Remark: Sequence connection from [source: A Walker]
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene