WormBase Tree Display for Gene: WBGene00006251

WBGene00006251 SMap: S_parent: Sequence: C42D4
  Identity: Version: 1
    Name: CGC_name: str-220 Person_evidence: WBPerson42
      Sequence_name: C42D4.9
      Molecular_name: C42D4.9
        C42D4.9.1
        CE24842
      Other_name: CELE_C42D4.9 Accession_evidence: NDB BX284604
      Public_name: str-220
    DB_info: Database: AceView gene 4H932
        WormQTL gene WBGene00006251
        WormFlux gene WBGene00006251
        NDB locus_tag CELE_C42D4.9
        Panther gene CAEEL|WormBase=WBGene00006251|UniProtKB=Q18568
          family PTHR22943
        NCBI gene 192031
        RefSeq protein NM_068728.1
        TrEMBL UniProtAcc Q18568
        UniProt_GCRP UniProtAcc Q18568
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:40 WBPerson1971 Event: Imported: Initial conversion from geneace
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: str
    Allele (21)
    Strain: WBStrain00033079
      WBStrain00033122
    RNASeq_FPKM (74)
    GO_annotation: 00061679
      00061680
      00061681
      00061682
      00061683
    Ortholog (21)
    Paralog (268)
    Structured_description: Concise_description: str-220 encodes a seven transmembrane chemoreceptor; microarray analyses indicate that str-220 is expressed at higher levels in the AWB olfactory neurons than the AFD thermosensory neurons; anatomical expression studies confirm expression in the AWB neurons; expression of str-220 in AWB is regulated, in part, by the KIN-29 Ser/Thr kinase. Paper_evidence: WBPaper00005098
            WBPaper00024671
          Curator_confirmed: WBPerson1843
          Date_last_updated: 07 Jun 2007 00:00:00
      Automated_description: Predicted to enable G protein-coupled olfactory receptor activity. Predicted to be involved in G protein-coupled receptor signaling pathway and olfactory behavior. Predicted to be located in membrane. Expressed in AWBL and AWBR. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C42D4.9
    Corresponding_transcript: C42D4.9.1
  Experimental_info: RNAi_result: WBRNAi00011875 Inferred_automatically: RNAi_primary
      WBRNAi00042360 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr11099
      Expr1028568
      Expr1146347
      Expr2017033
    Drives_construct: WBCnstr00018495
      WBCnstr00034429
    Construct_product: WBCnstr00018495
      WBCnstr00034429
    Microarray_results (18)
    Expression_cluster (30)
    Interaction: WBInteraction000003520
      WBInteraction000030952
      WBInteraction000124753
      WBInteraction000126798
      WBInteraction000127304
      WBInteraction000133573
      WBInteraction000135715
      WBInteraction000142869
      WBInteraction000142920
      WBInteraction000143243
      WBInteraction000145570
      WBInteraction000149352
      WBInteraction000150640
      WBInteraction000162772
      WBInteraction000164304
      WBInteraction000166312
      WBInteraction000170253
      WBInteraction000171390
      WBInteraction000175241
      WBInteraction000177220
      WBInteraction000184247
      WBInteraction000184301
      WBInteraction000187097
      WBInteraction000188204
      WBInteraction000194576
      WBInteraction000194596
      WBInteraction000196242
      WBInteraction000196768
      WBInteraction000200990
      WBInteraction000203492
      WBInteraction000205240
      WBInteraction000206225
      WBInteraction000210543
      WBInteraction000212454
      WBInteraction000218505
      WBInteraction000220015
      WBInteraction000221828
      WBInteraction000225226
      WBInteraction000229441
      WBInteraction000229452
      WBInteraction000236627
      WBInteraction000240218
      WBInteraction000240280
      WBInteraction000241390
      WBInteraction000241681
      WBInteraction000245519
      WBInteraction000248671
      WBInteraction000250157
      WBInteraction000254064
      WBInteraction000255582
      WBInteraction000260650
      WBInteraction000262739
      WBInteraction000263048
      WBInteraction000264168
      WBInteraction000265034
      WBInteraction000268701
      WBInteraction000270439
      WBInteraction000275405
      WBInteraction000276906
      WBInteraction000277837
      WBInteraction000279710
      WBInteraction000287831
      WBInteraction000289392
      WBInteraction000289795
      WBInteraction000289995
      WBInteraction000292148
      WBInteraction000299211
      WBInteraction000301126
      WBInteraction000304423
      WBInteraction000305402
      WBInteraction000306116
      WBInteraction000309142
      WBInteraction000310549
      WBInteraction000314055
      WBInteraction000317767
      WBInteraction000323433
      WBInteraction000323928
      WBInteraction000327044
      WBInteraction000329038
      WBInteraction000332018
      WBInteraction000333361
      WBInteraction000333759
      WBInteraction000334656
      WBInteraction000336738
      WBInteraction000342021
      WBInteraction000342022
      WBInteraction000344223
      WBInteraction000345343
      WBInteraction000348886
      WBInteraction000353819
      WBInteraction000355295
      WBInteraction000356155
      WBInteraction000365904
      WBInteraction000366655
      WBInteraction000370598
      WBInteraction000373691
      WBInteraction000378960
      WBInteraction000379095
      WBInteraction000380224
      WBInteraction000381445
      WBInteraction000381633
      WBInteraction000385031
      WBInteraction000386543
      WBInteraction000389316
      WBInteraction000389365
      WBInteraction000391072
      WBInteraction000394248
      WBInteraction000395767
      WBInteraction000397148
      WBInteraction000397624
      WBInteraction000399669
      WBInteraction000401324
      WBInteraction000410779
      WBInteraction000412156
      WBInteraction000413009
      WBInteraction000414026
      WBInteraction000415156
      WBInteraction000417581
      WBInteraction000418101
      WBInteraction000423252
      WBInteraction000432466
      WBInteraction000434301
      WBInteraction000438783
      WBInteraction000442614
      WBInteraction000449396
      WBInteraction000457743
  Map_info: Map: IV Position: 3.29139 Error: 5.3e-05
    Positive: Positive_clone: C42D4 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00005098
    WBPaper00024671
    WBPaper00027292
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene