WormBase Tree Display for Gene: WBGene00005777
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| WBGene00005777 | Evidence | Person_evidence | WBPerson522 | |||||||
|---|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | K10G4 | |||||||
| Identity | Version | 2 | ||||||||
| Name | CGC_name | srw-30 | Person_evidence | WBPerson522 | ||||||
| Sequence_name | K10G4.9 | |||||||||
| Molecular_name | K10G4.9 | |||||||||
| Other_name | CELE_K10G4.9 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | srw-30 | |||||||||
| DB_info | Database | AceView | gene | 5R763 | ||||||
| WormQTL | gene | WBGene00005777 | ||||||||
| WormFlux | gene | WBGene00005777 | ||||||||
| NDB | locus_tag | CELE_K10G4.9 | ||||||||
| NCBI | gene | 3565559 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:39 | WBPerson1971 | Event | Imported | Initial conversion from geneace | |||
| 2 | 21 Sep 2017 13:44:01 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | srw | |||||||||
| Allele (77) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00056591 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| TreeFam | ||||||||||
| WBGene00155121 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| WBGene00120105 | Caenorhabditis japonica | From_analysis | TreeFam | |||||||
| Paralog (116) | ||||||||||
| Structured_description | Automated_description | Is affected by several genes including cyd-1; cdk-4; and rsr-2 based on tiling array; RNA-seq; and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | K10G4.9:wp261 | ||||||||
| Corresponding_pseudogene | K10G4.9 | |||||||||
| Experimental_info | Expr_pattern | Expr1026897 | ||||||||
| Expr1154261 | ||||||||||
| Drives_construct | WBCnstr00034735 | |||||||||
| Construct_product | WBCnstr00034735 | |||||||||
| Microarray_results | A_12_P120243 | |||||||||
| GPL14144_K10G4.9_527-586_0.952_1_A | ||||||||||
| GPL8304_CE_WBGene00005777_A | ||||||||||
| GPL8304_CE_WBGene00005777_B | ||||||||||
| Expression_cluster | WBPaper00037950:all-neurons_L1-larva_expressed | |||||||||
| WBPaper00037950:all-neurons_L2-larva_expressed | ||||||||||
| WBPaper00038438:S.marcescens_24hr_upregulated_TilingArray | ||||||||||
| WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray | ||||||||||
| WBPaper00053020:OrsayVirus-infection_upregulated_microarray | ||||||||||
| WBPaper00056284:ints-5(RNAi)_upregulated | ||||||||||
| WBPaper00040426:CYD-1_CDK-4_upregulated | ||||||||||
| Map_info | Map | V | Position | 12.8515 | Error | 0.000488 | ||||
| Positive | Positive_clone | K10G4 | Inferred_automatically | From CDS info | ||||||
| From sequence, transcript, pseudogene data | ||||||||||
| Pseudo_map_position | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
