WormBase Tree Display for Gene: WBGene00005011

WBGene00005011 SMap: S_parent: Sequence: F26F4
  Identity: Version: 2
    Name: Sequence_name: F26F4.8
      Molecular_name: F26F4.8
        F26F4.8.1
        CE41645
      Other_name: CELE_F26F4.8 Accession_evidence: NDB BX284603
      Public_name: F26F4.8
    DB_info: Database: AceView gene 3F992
        WormQTL gene WBGene00005011
        WormFlux gene WBGene00005011
        NDB locus_tag CELE_F26F4.8
        NCBI gene 184991
        RefSeq protein NM_001393332.1
        TREEFAM TREEFAM_ID TF316245
        TrEMBL UniProtAcc Q19820
        UniProt_GCRP UniProtAcc Q19820
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:37 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 26 Aug 2004 09:33:43 WBPerson1971 Name_change: CGC_name: Removed
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (19)
    Strain: WBStrain00002933
      WBStrain00002182
      WBStrain00002301
      WBStrain00000425
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP3867
    Ortholog (13)
    Paralog: WBGene00017832 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Enriched in several structures, including ABalaaaala; cephalic sheath cell; ciliated neurons; germ line; and male distal tip cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-12; hsf-1; and elt-2 based on microarray; tiling array; and RNA-seq studies. Is affected by eleven chemicals including rotenone; manganese chloride; and D-glucose based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Zinc finger, C2H2 type; Zinc finger C2H2 superfamily; and Zinc finger C2H2-type. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F26F4.8
    Corresponding_CDS_history: F26F4.8:wp183
    Corresponding_transcript: F26F4.8.1
    Associated_feature: WBsf651015
      WBsf978459
      WBsf226600
    Transcription_factor: WBTranscriptionFactor000890
  Experimental_info: RNAi_result: WBRNAi00045673 Inferred_automatically: RNAi_primary
      WBRNAi00005276 Inferred_automatically: RNAi_primary
      WBRNAi00013968 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram1495
      Chronogram1844
      Expr5881
      Expr5882
      Expr1023346
      Expr1032495
      Expr1149592
      Expr2003038
      Expr2021252
    Drives_construct: WBCnstr00002936
      WBCnstr00004460
      WBCnstr00004461
      WBCnstr00035269
    Construct_product: WBCnstr00035269
      WBCnstr00038847
    Microarray_results (18)
    Expression_cluster (153)
    Interaction: WBInteraction000525980
      WBInteraction000526010
      WBInteraction000527411
  Map_info: Map: III Position: -2.39353 Error: 0.003045
    Positive: Positive_clone: F26F4 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
    This gene was previously incorrectly identified as spt-1 based on an unintended error in the CGC strain data files Curator_confirmed: WBPerson1971
  Method: Gene