WormBase Tree Display for Gene: WBGene00005011
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WBGene00005011 | SMap | S_parent | Sequence | F26F4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | Sequence_name | F26F4.8 | |||||||
Molecular_name | F26F4.8 | ||||||||
F26F4.8.1 | |||||||||
CE41645 | |||||||||
Other_name | CELE_F26F4.8 | Accession_evidence | NDB | BX284603 | |||||
Public_name | F26F4.8 | ||||||||
DB_info | Database | AceView | gene | 3F992 | |||||
WormQTL | gene | WBGene00005011 | |||||||
WormFlux | gene | WBGene00005011 | |||||||
NDB | locus_tag | CELE_F26F4.8 | |||||||
NCBI | gene | 184991 | |||||||
RefSeq | protein | NM_001393332.1 | |||||||
TREEFAM | TREEFAM_ID | TF316245 | |||||||
TrEMBL | UniProtAcc | Q19820 | |||||||
UniProt_GCRP | UniProtAcc | Q19820 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 26 Aug 2004 09:33:43 | WBPerson1971 | Name_change | CGC_name | Removed | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (19) | |||||||||
Strain | WBStrain00002933 | ||||||||
WBStrain00002182 | |||||||||
WBStrain00002301 | |||||||||
WBStrain00000425 | |||||||||
RNASeq_FPKM (74) | |||||||||
Contained_in_operon | CEOP3867 | ||||||||
Ortholog (13) | |||||||||
Paralog | WBGene00017832 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
Structured_description | Automated_description | Enriched in several structures, including ABalaaaala; cephalic sheath cell; ciliated neurons; germ line; and male distal tip cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-12; hsf-1; and elt-2 based on microarray; tiling array; and RNA-seq studies. Is affected by eleven chemicals including rotenone; manganese chloride; and D-glucose based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Zinc finger, C2H2 type; Zinc finger C2H2 superfamily; and Zinc finger C2H2-type. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F26F4.8 | |||||||
Corresponding_CDS_history | F26F4.8:wp183 | ||||||||
Corresponding_transcript | F26F4.8.1 | ||||||||
Associated_feature | WBsf651015 | ||||||||
WBsf978459 | |||||||||
WBsf226600 | |||||||||
Transcription_factor | WBTranscriptionFactor000890 | ||||||||
Experimental_info | RNAi_result | WBRNAi00045673 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00005276 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00013968 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Chronogram1495 | ||||||||
Chronogram1844 | |||||||||
Expr5881 | |||||||||
Expr5882 | |||||||||
Expr1023346 | |||||||||
Expr1032495 | |||||||||
Expr1149592 | |||||||||
Expr2003038 | |||||||||
Expr2021252 | |||||||||
Drives_construct | WBCnstr00002936 | ||||||||
WBCnstr00004460 | |||||||||
WBCnstr00004461 | |||||||||
WBCnstr00035269 | |||||||||
Construct_product | WBCnstr00035269 | ||||||||
WBCnstr00038847 | |||||||||
Microarray_results (18) | |||||||||
Expression_cluster (153) | |||||||||
Interaction | WBInteraction000525980 | ||||||||
WBInteraction000526010 | |||||||||
WBInteraction000527411 | |||||||||
Map_info (3) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
This gene was previously incorrectly identified as spt-1 based on an unintended error in the CGC strain data files | Curator_confirmed | WBPerson1971 | |||||||
Method | Gene |