WormBase Tree Display for Gene: WBGene00004978
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WBGene00004978 | SMap | S_parent | Sequence | Y47G6A | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | spg-7 | Person_evidence | WBPerson530 | |||||
Sequence_name | Y47G6A.10 | ||||||||
Molecular_name | Y47G6A.10 | ||||||||
Y47G6A.10.1 | |||||||||
CE34400 | |||||||||
Other_name | phi-23 | Person_evidence | WBPerson2582 | ||||||
let-517 | Person_evidence | WBPerson533 | |||||||
Y47G6A_247.g | Curator_confirmed | WBPerson1983 | |||||||
Remark | Old cosmid naming mapped via unique overlapping PCR_product on CDSs | ||||||||
CELE_Y47G6A.10 | Accession_evidence | NDB | BX284601 | ||||||
Public_name | spg-7 | ||||||||
DB_info | Database (13) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:37 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 17 Mar 2005 13:54:35 | WBPerson2970 | Name_change | Other_name | phi-23 | ||||
3 | 05 Mar 2015 09:01:29 | WBPerson2970 | Event | Acquires_merge | WBGene00002708 | ||||
Name_change | Other_name | let-517 | |||||||
Acquires_merge | WBGene00002708 | ||||||||
Status | Live | ||||||||
Gene_info (11) | |||||||||
Disease_info | Potential_model | DOID:0050977 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:315) | ||||
DOID:0050952 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:315) | ||||||
DOID:0050944 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:315) | ||||||
DOID:0080840 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:315) | ||||||
Molecular_info | Corresponding_CDS | Y47G6A.10 | |||||||
Corresponding_CDS_history | Y47G6A.10:wp102 | ||||||||
Corresponding_transcript | Y47G6A.10.1 | ||||||||
Other_sequence (66) | |||||||||
Associated_feature (11) | |||||||||
Experimental_info | RNAi_result (117) | ||||||||
Expr_pattern | Expr4061 | ||||||||
Expr1015221 | |||||||||
Expr1032476 | |||||||||
Expr1160254 | |||||||||
Expr2016053 | |||||||||
Expr2034288 | |||||||||
Regulate_expr_cluster | WBPaper00041370:spg-7(RNAi)_upregulated | ||||||||
WBPaper00041370:spg-7(RNAi)_upregulated_atfs-1_dependent | |||||||||
Microarray_results (20) | |||||||||
Expression_cluster (117) | |||||||||
Interaction (149) | |||||||||
WBProcess | WBbiopr:00000077 | ||||||||
WBbiopr:00000079 | |||||||||
Map_info | Map | I | Position | -3.21963 | Error | 0.03887 | |||
Hide_under | WBGene00002709 | ||||||||
Positive | Positive_clone | Y47G6A | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Negative | Outside_rearr | hDf24 | |||||||
Mapping_data | Multi_point | 5016 | |||||||
Pos_neg_data | 8616 | ||||||||
8617 | |||||||||
8618 | |||||||||
8619 | |||||||||
Pseudo_map_position | |||||||||
Reference | WBPaper00003985 | ||||||||
WBPaper00011963 | |||||||||
WBPaper00011970 | |||||||||
WBPaper00019419 | |||||||||
WBPaper00024269 | |||||||||
WBPaper00027723 | |||||||||
WBPaper00029254 | |||||||||
WBPaper00029435 | |||||||||
WBPaper00031084 | |||||||||
WBPaper00035659 | |||||||||
WBPaper00035985 | |||||||||
WBPaper00036249 | |||||||||
WBPaper00038491 | |||||||||
WBPaper00040589 | |||||||||
WBPaper00041370 | |||||||||
WBPaper00046786 | |||||||||
WBPaper00047489 | |||||||||
WBPaper00048493 | |||||||||
WBPaper00049307 | |||||||||
WBPaper00049531 | |||||||||
WBPaper00049898 | |||||||||
WBPaper00052880 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00059413 | |||||||||
WBPaper00060307 | |||||||||
WBPaper00061178 | |||||||||
WBPaper00061526 | |||||||||
WBPaper00061852 | |||||||||
WBPaper00061974 | |||||||||
WBPaper00062237 | |||||||||
WBPaper00062467 | |||||||||
WBPaper00062573 | |||||||||
WBPaper00062599 | |||||||||
WBPaper00062642 | |||||||||
WBPaper00063971 | |||||||||
WBPaper00064182 | |||||||||
WBPaper00064339 | |||||||||
WBPaper00064568 | |||||||||
WBPaper00064717 | |||||||||
WBPaper00064934 | |||||||||
WBPaper00065625 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |