WormBase Tree Display for Gene: WBGene00004810
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WBGene00004810 | Evidence | CGC_data_submission | |||||
---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | Y60A3A | ||||
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | skr | ||||||
Allele (56) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00098536 | ||||||
00098537 | |||||||
00098538 | |||||||
00098539 | |||||||
00098540 | |||||||
00113217 | |||||||
Ortholog (64) | |||||||
Paralog (19) | |||||||
Structured_description | Concise_description | The skr-4 gene encodes a homolog of Skp1 in S. cerevisiae that has no known function in vivo, since skr-4(RNAi) animals are at least superficially normal. | Paper_evidence | WBPaper00005128 | |||
WBPaper00005129 | |||||||
Curator_confirmed | WBPerson567 | ||||||
Date_last_updated | 17 Jun 2004 00:00:00 | ||||||
Automated_description | Predicted to enable cullin family protein binding activity. Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm and nucleus. Expressed in intestine. Is an ortholog of human SKP1 (S-phase kinase associated protein 1). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y60A3A.18 | |||||
Corresponding_transcript | Y60A3A.18.1 | ||||||
Associated_feature | WBsf1003388 | ||||||
WBsf1021843 | |||||||
Experimental_info | RNAi_result | WBRNAi00069084 | Inferred_automatically | RNAi_primary | |||
WBRNAi00086783 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00057808 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00086782 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00086801 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00069085 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr2440 | ||||||
Expr1161240 | |||||||
Expr2015852 | |||||||
Expr2034085 | |||||||
Drives_construct | WBCnstr00010831 | ||||||
Construct_product | WBCnstr00010831 | ||||||
Microarray_results (15) | |||||||
Expression_cluster (246) | |||||||
Interaction | WBInteraction000543612 | ||||||
WBInteraction000549972 | |||||||
WBInteraction000549998 | |||||||
WBInteraction000550271 | |||||||
WBInteraction000567847 | |||||||
WBInteraction000576559 | |||||||
WBInteraction000580394 | |||||||
WBInteraction000583600 | |||||||
Map_info | Map | V | Position | 23.9984 | Error | 0.009899 | |
Positive | Positive_clone | Y60A3A | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00055090 | |||||||
WBPaper00059442 | |||||||
WBPaper00061319 | |||||||
WBPaper00062289 | |||||||
WBPaper00062345 | |||||||
WBPaper00065331 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |