WormBase Tree Display for Gene: WBGene00004810
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| WBGene00004810 | Evidence | CGC_data_submission | |||||||
|---|---|---|---|---|---|---|---|---|---|
| SMap | S_parent | Sequence | Y60A3A | ||||||
| Identity | Version | 1 | |||||||
| Name | CGC_name | skr-4 | Person_evidence | WBPerson322 | |||||
| Sequence_name | Y60A3A.18 | ||||||||
| Molecular_name | Y60A3A.18 | ||||||||
| Y60A3A.18.1 | |||||||||
| CE24523 | |||||||||
| Other_name | CELE_Y60A3A.18 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | skr-4 | ||||||||
| DB_info | Database | AceView | gene | 5U393 | |||||
| WormQTL | gene | WBGene00004810 | |||||||
| WormFlux | gene | WBGene00004810 | |||||||
| NDB | locus_tag | CELE_Y60A3A.18 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00004810|UniProtKB=Q9U1Y9 | |||||||
| family | PTHR11165 | ||||||||
| NCBI | gene | 191762 | |||||||
| RefSeq | protein | NM_075456.7 | |||||||
| TREEFAM | TREEFAM_ID | TF354233 | |||||||
| TrEMBL | UniProtAcc | Q9U1Y9 | |||||||
| UniProt_GCRP | UniProtAcc | Q9U1Y9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:36 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | skr | ||||||||
| Allele | WBVar00071910 | ||||||||
| WBVar01499709 | |||||||||
| WBVar02025998 | |||||||||
| WBVar02025999 | |||||||||
| WBVar01499566 | |||||||||
| WBVar00489073 | |||||||||
| WBVar00489074 | |||||||||
| WBVar00489075 | |||||||||
| WBVar00489076 | |||||||||
| WBVar01103544 | |||||||||
| WBVar00489077 | |||||||||
| WBVar01103545 | |||||||||
| WBVar01103546 | |||||||||
| WBVar01103547 | |||||||||
| WBVar01103548 | |||||||||
| WBVar01103549 | |||||||||
| WBVar01103550 | |||||||||
| WBVar01103551 | |||||||||
| WBVar02077952 | |||||||||
| WBVar01103552 | |||||||||
| WBVar01103553 | |||||||||
| WBVar01103554 | |||||||||
| WBVar01485790 | |||||||||
| WBVar01103555 | |||||||||
| WBVar01524887 | |||||||||
| WBVar01524888 | |||||||||
| WBVar01524889 | |||||||||
| WBVar01524890 | |||||||||
| WBVar01524891 | |||||||||
| WBVar01543794 | |||||||||
| WBVar01543795 | |||||||||
| WBVar01499446 | |||||||||
| WBVar01500000 | |||||||||
| WBVar01752375 | |||||||||
| WBVar01752376 | |||||||||
| WBVar02118699 | |||||||||
| WBVar01978361 | |||||||||
| WBVar01752377 | |||||||||
| WBVar01752378 | |||||||||
| WBVar01752379 | |||||||||
| WBVar01752380 | |||||||||
| WBVar01752381 | |||||||||
| WBVar01752382 | |||||||||
| WBVar01913749 | |||||||||
| WBVar01752383 | |||||||||
| WBVar01498549 | |||||||||
| WBVar01498925 | |||||||||
| WBVar02124978 | |||||||||
| WBVar01499299 | |||||||||
| WBVar00227644 | |||||||||
| WBVar01498958 | |||||||||
| WBVar02124642 | |||||||||
| WBVar02056346 | |||||||||
| WBVar00071907 | |||||||||
| WBVar00071908 | |||||||||
| WBVar00071909 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00098536 | ||||||||
| 00098537 | |||||||||
| 00098538 | |||||||||
| 00098539 | |||||||||
| 00098540 | |||||||||
| 00113217 | |||||||||
| Ortholog (64) | |||||||||
| Paralog (19) | |||||||||
| Structured_description | Concise_description | The skr-4 gene encodes a homolog of Skp1 in S. cerevisiae that has no known function in vivo, since skr-4(RNAi) animals are at least superficially normal. | Paper_evidence | WBPaper00005128 | |||||
| WBPaper00005129 | |||||||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 17 Jun 2004 00:00:00 | ||||||||
| Automated_description | Predicted to enable cullin family protein binding activity. Predicted to be involved in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process. Predicted to be located in cytoplasm and nucleus. Expressed in intestine. Is an ortholog of human SKP1 (S-phase kinase associated protein 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y60A3A.18 | |||||||
| Corresponding_transcript | Y60A3A.18.1 | ||||||||
| Associated_feature | WBsf1003388 | ||||||||
| WBsf1021843 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00069084 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00086783 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00057808 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00086782 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00086801 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00069085 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr2440 | ||||||||
| Expr1161240 | |||||||||
| Expr2015852 | |||||||||
| Expr2034085 | |||||||||
| Drives_construct | WBCnstr00010831 | ||||||||
| Construct_product | WBCnstr00010831 | ||||||||
| Microarray_results (15) | |||||||||
| Expression_cluster (246) | |||||||||
| Interaction | WBInteraction000543612 | ||||||||
| WBInteraction000549972 | |||||||||
| WBInteraction000549998 | |||||||||
| WBInteraction000550271 | |||||||||
| WBInteraction000567847 | |||||||||
| WBInteraction000576559 | |||||||||
| WBInteraction000580394 | |||||||||
| WBInteraction000583600 | |||||||||
| Map_info | Map | V | Position | 23.9984 | Error | 0.009899 | |||
| Positive | Positive_clone | Y60A3A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059442 | |||||||||
| WBPaper00061319 | |||||||||
| WBPaper00062289 | |||||||||
| WBPaper00062345 | |||||||||
| WBPaper00065331 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
