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WormBase Tree Display for Gene: WBGene00004467

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Name Class

WBGene00004467EvidenceCGC_data_submission
SMapS_parentSequenceK07D4
IdentityVersion1
NameCGC_namerpn-11Person_evidenceWBPerson1551
Sequence_nameK07D4.3
Molecular_nameK07D4.3
K07D4.3.1
CE19527
K07D4.3.2
Other_nameCELE_K07D4.3Accession_evidenceNDBBX284602
Public_namerpn-11
DB_infoDatabase (12)
SpeciesCaenorhabditis elegans
HistoryVersion_change107 Apr 2004 11:29:35WBPerson1971EventImportedInitial conversion from geneace
StatusLive
Gene_infoBiotypeSO:0001217
Gene_classrpn
Allele (36)
RNASeq_FPKM (74)
GO_annotation (19)
Ortholog (48)
ParalogWBGene00000817Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00001231Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
WBGene00018135Caenorhabditis elegansFrom_analysisPanther
WormBase-Compara
Structured_descriptionConcise_descriptionrpn-11 encodes a predicted non-ATPase subunit of the 19S regulatory complex of the proteasome that affects adult viability, osmoregulation, embryonic viability, and movement; interacts with itself, RPN-9, and F55A11.3, based on yeast two-hybrid assays.Paper_evidenceWBPaper00004888
WBPaper00005654
WBPaper00006395
Curator_confirmedWBPerson48
Date_last_updated17 Jun 2004 00:00:00
Automated_descriptionPredicted to enable metallopeptidase activity and proteasome binding activity. Involved in programmed cell death involved in cell development. Predicted to be part of proteasome regulatory particle, lid subcomplex. Is an ortholog of human PSMD14 (proteasome 26S subunit, non-ATPase 14).Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDSK07D4.3
Corresponding_transcriptK07D4.3.1
K07D4.3.2
Other_sequence (115)
Associated_featureWBsf649992
WBsf987466
WBsf222900
Experimental_infoRNAi_result (21)
Expr_patternExpr1011772
Expr1032270
Expr1153850
Expr2015486
Expr2033721
Drives_constructWBCnstr00008741
WBCnstr00008743
Construct_productWBCnstr00008743
Microarray_results (22)
Expression_cluster (153)
InteractionWBInteraction000028731
WBInteraction000034985
WBInteraction000034986
WBInteraction000036611
WBInteraction000036728
WBInteraction000037020
WBInteraction000037026
WBInteraction000037033
WBInteraction000037060
WBInteraction000038444
WBInteraction000038445
WBInteraction000040395
WBInteraction000040754
WBInteraction000040767
WBInteraction000040785
WBInteraction000040884
WBInteraction000041233
WBInteraction000044138
WBInteraction000045906
WBInteraction000046556
WBInteraction000047423
WBInteraction000047428
WBInteraction000047429
WBInteraction000047430
WBInteraction000047770
WBInteraction000048732
WBInteraction000048740
WBInteraction000048753
WBInteraction000048768
WBInteraction000048792
WBInteraction000048799
WBInteraction000049532
WBInteraction000049886
WBInteraction000049887
WBInteraction000049889
WBInteraction000050774
WBInteraction000050808
WBInteraction000101677
WBInteraction000102238
WBInteraction000102275
WBInteraction000102355
WBInteraction000102359
WBInteraction000102437
WBInteraction000102879
WBInteraction000102977
WBInteraction000102978
WBInteraction000103070
WBInteraction000103230
WBInteraction000103252
WBInteraction000103413
WBInteraction000103888
WBInteraction000104022
WBInteraction000104104
WBInteraction000104428
WBInteraction000105102
WBInteraction000106411
WBInteraction000108859
WBInteraction000111046
WBInteraction000111171
WBInteraction000111195
WBInteraction000111208
WBInteraction000111214
WBInteraction000111449
WBInteraction000111463
WBInteraction000111473
WBInteraction000111499
WBInteraction000111513
WBInteraction000111532
WBInteraction000111615
WBInteraction000111616
WBInteraction000111617
WBInteraction000111618
WBInteraction000111743
WBInteraction000111762
WBInteraction000112152
WBInteraction000113356
WBInteraction000120627
WBInteraction000124987
WBInteraction000125689
WBInteraction000125690
WBInteraction000127252
WBInteraction000139215
WBInteraction000139378
WBInteraction000143245
WBInteraction000146751
WBInteraction000148603
WBInteraction000148889
WBInteraction000151790
WBInteraction000151987
WBInteraction000153590
WBInteraction000154989
WBInteraction000154990
WBInteraction000154991
WBInteraction000157158
WBInteraction000163164
WBInteraction000163941
WBInteraction000164130
WBInteraction000171478
WBInteraction000183371
WBInteraction000184293
WBInteraction000186005
WBInteraction000186229
WBInteraction000186582
WBInteraction000192109
WBInteraction000195000
WBInteraction000196257
WBInteraction000199848
WBInteraction000210144
WBInteraction000211231
WBInteraction000214605
WBInteraction000218066
WBInteraction000218100
WBInteraction000218101
WBInteraction000218102
WBInteraction000218103
WBInteraction000218200
WBInteraction000227041
WBInteraction000229042
WBInteraction000233267
WBInteraction000234832
WBInteraction000242878
WBInteraction000246373
WBInteraction000260511
WBInteraction000262856
WBInteraction000264496
WBInteraction000268803
WBInteraction000269967
WBInteraction000269973
WBInteraction000270254
WBInteraction000272305
WBInteraction000276188
WBInteraction000279275
WBInteraction000289324
WBInteraction000296315
WBInteraction000296825
WBInteraction000298818
WBInteraction000298819
WBInteraction000305187
WBInteraction000308602
WBInteraction000315519
WBInteraction000315581
WBInteraction000315582
WBInteraction000316544
WBInteraction000317916
WBInteraction000318583
WBInteraction000318710
WBInteraction000318927
WBInteraction000320705
WBInteraction000322114
WBInteraction000323293
WBInteraction000325722
WBInteraction000327615
WBInteraction000328835
WBInteraction000333811
WBInteraction000334684
WBInteraction000338816
WBInteraction000341854
WBInteraction000345058
WBInteraction000347631
WBInteraction000355291
WBInteraction000356264
WBInteraction000359196
WBInteraction000364700
WBInteraction000374173
WBInteraction000378752
WBInteraction000379960
WBInteraction000385348
WBInteraction000387237
WBInteraction000388946
WBInteraction000405788
WBInteraction000409385
WBInteraction000414563
WBInteraction000415198
WBInteraction000415474
WBInteraction000416069
WBInteraction000417155
WBInteraction000423121
WBInteraction000424130
WBInteraction000427440
WBInteraction000428510
WBInteraction000433172
WBInteraction000433645
WBInteraction000437927
WBInteraction000439391
WBInteraction000445569
WBInteraction000452076
WBInteraction000452414
WBInteraction000457269
WBInteraction000457270
WBInteraction000460106
WBInteraction000466777
WBInteraction000467179
WBInteraction000467681
WBInteraction000468051
WBInteraction000469031
WBInteraction000469082
WBInteraction000470621
WBInteraction000471359
WBInteraction000471499
WBInteraction000474300
WBInteraction000475122
WBInteraction000475304
WBInteraction000519526
WBInteraction000519575
WBInteraction000519576
WBInteraction000519577
WBInteraction000519578
WBInteraction000519579
WBInteraction000520324
WBInteraction000523566
WBInteraction000542100
WBInteraction000542559
WBInteraction000550213
WBInteraction000551123
WBInteraction000551124
WBInteraction000551125
WBInteraction000551126
WBInteraction000551127
WBInteraction000551128
WBInteraction000551129
WBInteraction000551130
WBInteraction000551131
WBInteraction000551133
WBInteraction000553113
WBInteraction000554329
WBInteraction000555049
WBInteraction000559001
WBInteraction000559369
WBInteraction000560518
WBInteraction000560521
WBInteraction000560544
WBInteraction000560545
WBInteraction000560546
WBInteraction000560547
WBInteraction000560548
WBInteraction000560549
WBInteraction000560550
WBInteraction000560551
WBInteraction000561526
WBInteraction000562675
WBInteraction000566132
WBInteraction000567738
WBInteraction000572119
WBInteraction000573552
WBInteraction000577049
WBInteraction000577199
WBInteraction000583641
WBInteraction000584013
Map_infoMapIIPosition-5.68933Error0.009759
PositivePositive_cloneK07D4Inferred_automaticallyFrom CDS info
From sequence, transcript, pseudogene data
Pseudo_map_position
Reference (14)
RemarkMap position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC.CGC_data_submission
MethodGene