WormBase Tree Display for Gene: WBGene00004423
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| WBGene00004423 | SMap | S_parent | Sequence | F07D10 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | CGC_name | rpl-11.2 | |||||||
| Sequence_name | F07D10.1 | ||||||||
| Molecular_name | F07D10.1 | ||||||||
| F07D10.1.1 | |||||||||
| CE07033 | |||||||||
| Other_name | CELE_F07D10.1 | Accession_evidence | NDB | BX284606 | |||||
| Public_name | rpl-11.2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:35 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rpl | ||||||||
| Allele (13) | |||||||||
| Legacy_information | Orthologous to yeast (S.cerevisiae) ribosomal protein rpl11 using blastP | ||||||||
| Strain | WBStrain00003498 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (14) | |||||||||
| Ortholog (39) | |||||||||
| Paralog | WBGene00004422 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | rpl-11.2 encodes a large ribosomal subunit L11 protein; by homology, RPL-11.2 is predicted to function in protein biosynthesis. | Paper_evidence | WBPaper00004424 | |||||
| WBPaper00005654 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 25 Jan 2005 00:00:00 | ||||||||
| Automated_description | Predicted to enable RNA binding activity. Predicted to be a structural constituent of ribosome. Predicted to be involved in translation. Predicted to be located in cytoplasm; nucleus; and ribosome. Predicted to be part of cytosolic large ribosomal subunit. Expressed in embryonic cell; head; posterior gonad arm; and tail. Human ortholog(s) of this gene implicated in Diamond-Blackfan anemia 7 and T-cell acute lymphoblastic leukemia. Is an ortholog of human RPL11 (ribosomal protein L11). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111878 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10301) | ||||
| DOID:5603 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:10301) | ||||||
| Molecular_info | Corresponding_CDS | F07D10.1 | |||||||
| Corresponding_transcript | F07D10.1.1 | ||||||||
| Other_sequence (210) | |||||||||
| Associated_feature | WBsf047604 | ||||||||
| WBsf655636 | |||||||||
| WBsf670168 | |||||||||
| WBsf237064 | |||||||||
| WBsf237065 | |||||||||
| Experimental_info | RNAi_result (12) | ||||||||
| Expr_pattern | Chronogram967 | ||||||||
| Expr5672 | |||||||||
| Expr10953 | |||||||||
| Expr13134 | |||||||||
| Expr1029222 | |||||||||
| Expr1032227 | |||||||||
| Expr1147877 | |||||||||
| Expr2015439 | |||||||||
| Expr2033674 | |||||||||
| Drives_construct | WBCnstr00003956 | ||||||||
| WBCnstr00035498 | |||||||||
| Construct_product | WBCnstr00035498 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (237) | |||||||||
| Interaction (221) | |||||||||
| Map_info | Map | X | Position | -15.9993 | |||||
| Positive | Positive_clone | F07D10 | Inferred_automatically | From CDS info | |||||
| From sequence, transcript, pseudogene data | |||||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00024924 | ||||||||
| WBPaper00030511 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00047582 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00060474 | |||||||||
| WBPaper00061791 | |||||||||
| WBPaper00063976 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
