WormBase Tree Display for Gene: WBGene00004332
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| WBGene00004332 | SMap | S_parent | Sequence | Y18H1A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | rec-1 | Person_evidence | WBPerson533 | |||||
| WBPerson1795 | |||||||||
| Sequence_name | Y18H1A.7 | ||||||||
| Molecular_name | Y18H1A.7a | ||||||||
| Y18H1A.7a.1 | |||||||||
| CE33587 | |||||||||
| Y18H1A.7b | |||||||||
| CE49243 | |||||||||
| Y18H1A.7b.1 | |||||||||
| Other_name | CELE_Y18H1A.7 | Accession_evidence | NDB | BX284601 | |||||
| Public_name | rec-1 | ||||||||
| DB_info | Database | NDB | locus_tag | CELE_Y18H1A.7 | |||||
| NCBI | gene | 171664 | |||||||
| RefSeq | protein | NM_058372.8 | |||||||
| NM_001306247.3 | |||||||||
| TrEMBL | UniProtAcc | V6CLD8 | |||||||
| Q9BL91 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9BL91 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:35 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 13 Oct 2015 08:38:50 | WBPerson2970 | Event | Acquires_merge | WBGene00021211 | ||||
| Name_change | Sequence_name | Y18H1A.7 | |||||||
| Acquires_merge | WBGene00021211 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | rec | ||||||||
| Reference_allele | WBVar00241753 | ||||||||
| Allele | WBVar02015759 | ||||||||
| WBVar01545551 | |||||||||
| WBVar00147794 | |||||||||
| WBVar00306076 | |||||||||
| WBVar00095290 | |||||||||
| WBVar00324747 | |||||||||
| WBVar00324748 | |||||||||
| WBVar00324749 | |||||||||
| WBVar00324750 | |||||||||
| WBVar01555022 | |||||||||
| WBVar00324751 | |||||||||
| WBVar02144879 | |||||||||
| WBVar02144880 | |||||||||
| WBVar02144881 | |||||||||
| WBVar02144882 | |||||||||
| WBVar01499786 | |||||||||
| WBVar02152433 | |||||||||
| WBVar01499619 | |||||||||
| WBVar00303877 | |||||||||
| WBVar01474607 | |||||||||
| WBVar02028111 | |||||||||
| WBVar01404733 | |||||||||
| WBVar00241753 | |||||||||
| WBVar01429886 | |||||||||
| WBVar01429887 | |||||||||
| WBVar01429888 | |||||||||
| WBVar01429889 | |||||||||
| WBVar01429890 | |||||||||
| WBVar01429891 | |||||||||
| WBVar01680769 | |||||||||
| WBVar01680770 | |||||||||
| WBVar01429892 | |||||||||
| WBVar01680771 | |||||||||
| WBVar01680772 | |||||||||
| WBVar01826316 | |||||||||
| WBVar00608810 | |||||||||
| WBVar00608811 | |||||||||
| WBVar00608812 | |||||||||
| WBVar00608813 | |||||||||
| WBVar00608814 | |||||||||
| WBVar00608815 | |||||||||
| Legacy_information | s180 : general enhancer of meiotic recombination. ES1. | ||||||||
| Increase recomb. | |||||||||
| See also s180 | |||||||||
| [Rose AM ] increases meiotic recombination in gene clusters, reduces recombination on chromosome arms, distribution of crossovers in Rec-1 approximates physical map. ES1 ME3 NA1. | |||||||||
| [C.elegansII] s180 : increases meiotic recombination in gene clusters, reduces recombination on chromosome arms; distribution of crossovers in Rec-1 approximates physical map. ES1, ME3. NA1. [Rose and Baillie 1979; Zetka and Rose 1995; KR] | |||||||||
| Strain (22) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00091998 | ||||||||
| 00091999 | |||||||||
| 00092000 | |||||||||
| Ortholog | chrI_pilon.g113 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| Structured_description | Concise_description | rec-1 affects the recombination frequency in the central gene cluster region of autosomes and has been shown to alter the distribution of genes on the genetic map of the X chromosome, also affects X-chromosome nondisjunction; does not appear to act pre-meiotically. | Paper_evidence | WBPaper00001046 | |||||
| WBPaper00002339 | |||||||||
| WBPaper00017219 | |||||||||
| Curator_confirmed | WBPerson48 | ||||||||
| WBPerson1843 | |||||||||
| Date_last_updated | 29 Sep 2015 00:00:00 | ||||||||
| Automated_description | Involved in meiotic DNA double-strand break formation involved in reciprocal meiotic recombination. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y18H1A.7a | |||||||
| Y18H1A.7b | |||||||||
| Corresponding_CDS_history | Y18H1A.7:wp96 | ||||||||
| Corresponding_transcript | Y18H1A.7a.1 | ||||||||
| Y18H1A.7b.1 | |||||||||
| Associated_feature | WBsf648913 | ||||||||
| WBsf982561 | |||||||||
| WBsf1009119 | |||||||||
| WBsf218932 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00055631 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00084348 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00103863 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1028467 | ||||||||
| Expr1039252 | |||||||||
| Expr1159145 | |||||||||
| Expr2015290 | |||||||||
| Expr2033524 | |||||||||
| Drives_construct | WBCnstr00020890 | ||||||||
| WBCnstr00020891 | |||||||||
| WBCnstr00020892 | |||||||||
| Construct_product | WBCnstr00020890 | ||||||||
| WBCnstr00020892 | |||||||||
| Microarray_results (14) | |||||||||
| Expression_cluster (93) | |||||||||
| WBProcess | WBbiopr:00000109 | ||||||||
| Map_info | Map | I | Position | -18.5556 | |||||
| Well_ordered | |||||||||
| Positive | Inside_rearr | eDf24 | |||||||
| Positive_clone | Y18H1A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Mapping_data | Pos_neg_data | 8939 | |||||||
| 8940 | |||||||||
| 8941 | |||||||||
| 8942 | |||||||||
| 8943 | |||||||||
| Reference (28) | |||||||||
| Method | Gene |
