WormBase Tree Display for Gene: WBGene00004256
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WBGene00004256 | Evidence | Person_evidence | WBPerson345 | ||||||
---|---|---|---|---|---|---|---|---|---|
SMap | S_parent | Sequence | ZK994 | ||||||
Identity | Version | 2 | |||||||
Name | CGC_name | pxn-1 | Person_evidence | WBPerson345 | |||||
Sequence_name | ZK994.3 | ||||||||
Molecular_name | ZK994.3 | ||||||||
ZK994.3.1 | |||||||||
CE40298 | |||||||||
Other_name | CELE_ZK994.3 | Accession_evidence | NDB | BX284605 | |||||
Public_name | pxn-1 | ||||||||
DB_info | Database (12) | ||||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 07 Apr 2004 11:29:34 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
2 | 26 May 2006 16:35:34 | WBPerson1849 | Event | Acquires_merge | WBGene00022841 | ||||
Acquires_merge | WBGene00022841 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | pxn | ||||||||
Allele (85) | |||||||||
Strain | WBStrain00031626 | ||||||||
WBStrain00050780 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation (19) | |||||||||
Ortholog (55) | |||||||||
Paralog | WBGene00004257 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00009897 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00022743 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00015841 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00017968 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00019970 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00008627 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00019613 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00016700 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00011530 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
Panther | |||||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Predicted to enable peroxidase activity. Involved in muscle attachment and positive regulation of axon guidance. Located in basement membrane. Expressed in several structures, including egg-laying apparatus; excretory cell; intestine; somatic nervous system; and spermathecal-uterine valve cell. Human ortholog(s) of this gene implicated in several diseases, including Alzheimer's disease 1; asthma (multiple); kidney failure (multiple); and lung disease (multiple). Is an ortholog of human PXDN (peroxidasin) and PXDNL (peroxidasin like). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model (21) | ||||||||
Molecular_info | Corresponding_CDS | ZK994.3 | |||||||
Corresponding_CDS_history | ZK994.3:wp112 | ||||||||
ZK994.3:wp159 | |||||||||
Corresponding_transcript | ZK994.3.1 | ||||||||
Other_sequence (12) | |||||||||
Associated_feature (18) | |||||||||
Experimental_info | RNAi_result | WBRNAi00059883 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00022255 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00038524 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00022256 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00038525 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00059882 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr12146 | ||||||||
Expr12147 | |||||||||
Expr1018057 | |||||||||
Expr1032099 | |||||||||
Expr1163304 | |||||||||
Expr2015200 | |||||||||
Expr2033434 | |||||||||
Drives_construct (3) | |||||||||
Construct_product | WBCnstr00020279 | ||||||||
WBCnstr00035607 | |||||||||
Microarray_results (24) | |||||||||
Expression_cluster (163) | |||||||||
Interaction (49) | |||||||||
Map_info | Map | V | Position | 1.43195 | Error | 0.002031 | |||
Positive | Positive_clone | ZK994 | Inferred_automatically | From CDS info | |||||
From sequence, transcript, pseudogene data | |||||||||
Mapping_data | Multi_point | 4596 | |||||||
Pseudo_map_position | |||||||||
Reference (11) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |