WormBase Tree Display for Gene: WBGene00004190

WBGene00004190 SMap: S_parent: Sequence: T27F6
  Identity: Version: 2
    Name: CGC_name: pars-2 Person_evidence: WBPerson36
            WBPerson10953
      Sequence_name: T27F6.5
      Molecular_name (12)
      Other_name: prs-2
        CELE_T27F6.5 Accession_evidence: NDB BX284601
      Public_name: pars-2
    DB_info: Database (12)
    Species: Caenorhabditis elegans
    History: Version_change: 1 07 Apr 2004 11:29:34 WBPerson1971 Event: Imported: Initial conversion from geneace
        2 29 Jan 2010 14:16:16 WBPerson2970 Name_change: CGC_name: pars-2
                Other_name: prs-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: pars
    Allele (57)
    Strain: WBStrain00003363
    RNASeq_FPKM (74)
    GO_annotation (15)
    Contained_in_operon: CEOP1668
    Ortholog (42)
    Paralog: WBGene00044344 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00004189 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00006617 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable proline-tRNA ligase activity. Predicted to be involved in prolyl-tRNA aminoacylation. Predicted to be located in mitochondrion. Human ortholog(s) of this gene implicated in developmental and epileptic encephalopathy 75. Is an ortholog of human PARS2 (prolyl-tRNA synthetase 2, mitochondrial). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0112211 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:30563)
  Molecular_info: Corresponding_CDS: T27F6.5a
      T27F6.5b
      T27F6.5c
      T27F6.5d
    Corresponding_transcript: T27F6.5a.1
      T27F6.5b.1
      T27F6.5c.1
      T27F6.5d.1
    Other_sequence (21)
    Associated_feature: WBsf643761
      WBsf985571
      WBsf985572
      WBsf985573
      WBsf985574
      WBsf985575
      WBsf1010898
      WBsf1010899
      WBsf1010900
      WBsf218598
  Experimental_info: RNAi_result: WBRNAi00061690 Inferred_automatically: RNAi_primary
      WBRNAi00036048 Inferred_automatically: RNAi_primary
      WBRNAi00116863 Inferred_automatically: RNAi_primary
      WBRNAi00093113 Inferred_automatically: RNAi_primary
      WBRNAi00054342 Inferred_automatically: RNAi_primary
      WBRNAi00026420 Inferred_automatically: RNAi_primary
      WBRNAi00026421 Inferred_automatically: RNAi_primary
      WBRNAi00004329 Inferred_automatically: RNAi_primary
      WBRNAi00071066 Inferred_automatically: RNAi_primary
      WBRNAi00093133 Inferred_automatically: RNAi_primary
    Expr_pattern: Chronogram1177
      Expr6796
      Expr1029198
      Expr1032050
      Expr1157888
      Expr2014739
      Expr2032973
    Drives_construct: WBCnstr00003834
    Microarray_results (45)
    Expression_cluster (93)
    Interaction: WBInteraction000111338
      WBInteraction000112334
      WBInteraction000144413
      WBInteraction000144472
      WBInteraction000145214
      WBInteraction000149002
      WBInteraction000150692
      WBInteraction000153105
      WBInteraction000192434
      WBInteraction000195785
      WBInteraction000206350
      WBInteraction000208899
      WBInteraction000250103
      WBInteraction000265170
      WBInteraction000269274
      WBInteraction000292292
      WBInteraction000296177
      WBInteraction000304994
      WBInteraction000307637
      WBInteraction000313756
      WBInteraction000315332
      WBInteraction000324516
      WBInteraction000329250
      WBInteraction000333523
      WBInteraction000333584
      WBInteraction000340017
      WBInteraction000340320
      WBInteraction000347685
      WBInteraction000353432
      WBInteraction000356884
      WBInteraction000367355
      WBInteraction000367914
      WBInteraction000372574
      WBInteraction000373470
      WBInteraction000376086
      WBInteraction000377272
      WBInteraction000380620
      WBInteraction000394530
      WBInteraction000396520
      WBInteraction000405652
      WBInteraction000413111
      WBInteraction000414858
      WBInteraction000420932
      WBInteraction000428429
      WBInteraction000433098
      WBInteraction000439272
      WBInteraction000439831
      WBInteraction000455810
      WBInteraction000459591
      WBInteraction000462175
      WBInteraction000464434
      WBInteraction000466347
      WBInteraction000468244
      WBInteraction000472449
      WBInteraction000472595
      WBInteraction000473098
      WBInteraction000474280
      WBInteraction000474743
      WBInteraction000574160
      WBInteraction000576377
  Map_info: Map: I Position: 13.2372 Error: 0.001975
    Positive: Positive_clone: T27F6 Inferred_automatically: From CDS info
            From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00049490
    WBPaper00055090
    WBPaper00064339
  Remark: Connection made from predicted gene which has synthetase Pfam domain similarity. [sdm 12/01]
    dl1 : probably cytoplasmic
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene